1NDM

Crystal structure of Fab fragment of antibody HyHEL-26 complexed with lysozyme

Structural Biology Knowledgebase: 1NDM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.208

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NDM

Classification: IMMUNE SYSTEM / HYDROLASE

Total Structure Weight: 60808.80

Macromolecule Entities
Molecule Chains Length Organism Details
antibody kappa light chain A 214 Mus musculus Fragment: light chain
Details: first chain of Anti-Lysozyme Antibody HyHEL-26
Gene Name(s):
immunoglobulin gamma 1 chain B 210 Mus musculus Details: second chain of Anti-Lysozyme Antibody HyHEL-26
Gene Name(s): Igh-1a
Lysozyme C C 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Gene Name(s): LYZ Gene View


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.208
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 90.68 α = 90.00
b = 164.02 β = 90.00
c = 40.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-09
  • Released Date: 2003-06-03
  • Deposition author(s): Mariuzza, R.A., Li, Y., Li, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4