1KV3

HUMAN TISSUE TRANSGLUTAMINASE IN GDP BOUND FORM

Structural Biology Knowledgebase: 1KV3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.233

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1KV3

Classification: TRANSFERASE

Total Structure Weight: 466712.34

Macromolecule Entities
Molecule Chains Length Organism Details
Protein-glutamine gamma-glutamyltransferase A, B, C..., D, E, FA, B, C, D, E, F 687 Homo sapiens EC#: 2.3.2.13 IUBMB
Mutation: E51Q, E186Q, V224G, N533T, L655V
Gene Name(s): TGM2 Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, B, C, D, E, F GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.233
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 132.48 α = 90.00
b = 168.80 β = 90.00
c = 238.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-01-24
  • Released Date: 2002-03-13
  • Deposition author(s): Liu, S., Cerione, R.A., Clardy, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4