1E6J

Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5

Structural Biology Knowledgebase: 1E6J SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.210

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1E6J

Classification: VIRAL PROTEIN

Total Structure Weight: 70028.05

Macromolecule Entities
Molecule Chains Length Organism Details
IMMUNOGLOBULIN H 219 Mus musculus Fragment: HEAVY CHAIN 1-219
Details: OBTAINED BY PAPAIN CLEAVAGE (FAB)
Gene Name(s): Igh
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
IMMUNOGLOBULIN L 210 Mus musculus Fragment: LIGHT CHAIN 1-210
Details: OBTAINED BY PAPAIN CLEAVAGE (FAB)
CAPSID PROTEIN P24 P 210 Human immunodeficiency virus 1 Fragment: GAG POLYPROTEIN RESIDUES 143-352
Details: HIS6 TAG AT N-TERM, PRO1 AND ILE2 DELETED, C-TERMINUS MODIFIED
Gene Name(s): gag
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.210
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 193.08 α = 90.00
b = 45.60 β = 132.41
c = 132.47 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-18
  • Released Date: 2000-11-27
  • Deposition author(s): Berthet-Colominas, C., Monaco, S., Novelli, A., Sibai, G., Mallet, F., Cusack, S.

Revision History

  • 2014-03-12
    Type: Function and keywords | Details: KEYWDS
  • 2014-03-12
    Type: Citation | Details: JRNL,REMARK 1
  • 2014-03-12
    Type: Sequence database correspondence | Details: DBREF
  • 2014-03-12
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2014-03-12
    Type: Polymer description | Details: COMPND
  • 2014-03-12
    Type: Entry authorship | Details: AUTHOR
  • 2014-03-12
    Type: Source and taxonomy | Details: SOURCE
  • 2014-03-12
    Type: Other | Details: MASTER,HEADER,REMARK 280
  • 2014-03-12
    Type: Version format compliance | Details: REMARK 4