NMR Ensemble

1DLZ

SOLUTION STRUCTURE OF THE CHANNEL-FORMER ZERVAMICIN IIB (PEPTAIBOL ANTIBIOTIC)

Structural Biology Knowledgebase: 1DLZ SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: Best 20 Out of 100 with Ca Backbone Rmsd No Less Than 0.05 Angstroms

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1DLZ

Classification: ANTIBIOTIC

Total Structure Weight: 1823.20

Macromolecule Entities
Molecule Chains Length Organism Details
ZERVAMICIN IIB A 17 Emericellopsis salmosynnemata

Small Molecules
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000159 (GLN,ACE,TRP,THR,DIV,HYP,PHL,PRO,LEU,ILE,AIB) A Zervamicin IIB Peptaibol /
Antibiotic
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: BEST 20 OUT OF 100 WITH CA BACKBONE RMSD NO LESS THAN 0.05 ANGSTROMS

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-13
  • Released Date: 2000-02-03
  • Deposition author(s): Balashova, T.A., Shenkarev, Z.O., Tagaev, A.A., Ovchinnikova, T.V., Raap, J., Arseniev, A.S.

Revision History

  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-27
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-27
    Type: Linkage | Details: Linkage
  • 2011-07-27
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-27
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry
  • 2011-07-27
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-27
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-27
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4