1D1C

DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH N-METHYL-O-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE.

Structural Biology Knowledgebase: 1D1C SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Observed: 0.181

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1D1C

Classification: CONTRACTILE PROTEIN

Total Structure Weight: 87181.31

Macromolecule Entities
Molecule Chains Length Organism Details
MYOSIN A 761 Dictyostelium discoideum Fragment: S1DC MOTOR DOMAIN
Mutation: Y312C, Q760P, R761N
Gene Name(s): mhcA DDB_G0286355

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NMQ
Query on NMQ

A N-METHYL O-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE
C9 H13 Be F3 N2 O9 P2
LIFJVXDWLUOXQS-UHFFFAOYSA-J
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Observed: 0.181
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 103.90 α = 90.00
b = 180.90 β = 90.00
c = 54.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-09-15
  • Released Date: 2000-01-12
  • Deposition author(s): Gulick, A.M., Bauer, C.B., Thoden, J.B., Pate, E., Yount, R.G., Rayment, I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4