1C40

BAR-HEADED GOOSE HEMOGLOBIN (AQUOMET FORM)

Structural Biology Knowledgebase: 1C40 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1C40

Classification: OXYGEN STORAGE / TRANSPORT

Total Structure Weight: 32907.80

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (HEMOGLOBIN (ALPHA CHAIN)) A 141 Anser indicus Mutation: D85N
Gene Name(s): HBAA
PROTEIN (HEMOGLOBIN (BETA CHAIN)) B 146 Anser indicus Gene Name(s): HBB Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.197
  • Space Group: P 42 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 81.50 α = 90.00
b = 81.50 β = 90.00
c = 107.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-08-03
  • Released Date: 1999-08-09
  • Deposition author(s): Li, S., Liu, X., Jing, H., Hua, Z., Zhang, R., Lu, G.
  • Previous versions: 1C0H

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4