4Y1Z

Complex of human Galectin-1 and Galbeta1-4(6CO2)GlcNAc


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.23 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 4Y1Z

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 34680.68

Macromolecule Entities
Molecule Chains Length Organism Details
Galectin-1 A, B 154 Homo sapiens Gene Name(s): LGALS1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
6C2
Query on 6C2

A, B methyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranosiduronic acid
C9 H15 N O7
HPXHVBAASZCSSR-CRYJZLASSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GAL
Query on GAL

A, B BETA-D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-FPRJBGLDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSO
Query on CSO
A, B L-PEPTIDE LINKING C3 H7 N O3 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.23 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.204
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 43.04 α = 90.00
b = 58.27 β = 90.00
c = 111.10 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2015-02-09
  • Released Date: 2016-04-06
  • Deposition author(s): Lin, H.Y., Hsieh, T.J., Lin, C.H.

Revision History

  • Version 1_0: 2016-04-06

    Type: Initial release