4TQ8

Dual binding mode for 3-(9H-fluoren-9-ylideneaminooxy)propanoic acid binding to Human transthyretin (TTR)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.52 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 4TQ8

Classification: HORMONE

Total Structure Weight: 28213.41

Macromolecule Entities
Molecule Chains Length Organism Details
Transthyretin A, B 127 Homo sapiens Gene Name(s): TTR Gene View PALB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
7BD
Query on 7BD

A, B 3-[(9H-fluoren-9-ylideneamino)oxy]propanoic acid
3-(9H-fluoren-9-ylideneaminooxy)propanoic acid (Synonym)
C16 H13 N O3
LASWLEUVWJDDBA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.52 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.186
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 43.14 α = 90.00
b = 86.04 β = 90.00
c = 63.48 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2014-06-10
  • Released Date: 2015-06-24
  • Deposition author(s): Ciccone, L., Orlandini, E., Nencetti, S., Rossello, A., Stura, E.A.

Revision History

  • Version 1_0: 2015-06-24

    Type: Initial release

  • Version 1_1: 2015-08-12

    Type: Database references

  • Version 1_2: 2015-08-26

    Type: Database references

  • Version 1_3: 2017-11-22

    Type: Derived calculations, Refinement description