3VFP

crystal structure of HLA B*3508 LPEP158G, HLA mutant Gly158


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 3VFP

Classification: IMMUNE SYSTEM

Total Structure Weight: 45204.07

Macromolecule Entities
Molecule Chains Length Organism Details
MHC class I antigen A 276 Homo sapiens Mutation: A158G
Beta-2-microglobulin B 99 Homo sapiens
LPEP peptide from EBV, LPEPLPQGQLTAY C 13 Human gammaherpesvirus 4 Gene Name(s): BZLF1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.207
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 50.99 α = 90.00
b = 81.50 β = 90.00
c = 110.90 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2012-01-10
  • Released Date: 2012-03-07
  • Deposition author(s): Liu, Y.C., Rossjohn, J., Gras, S.

Revision History

  • Version 1_0: 2012-03-07

    Type: Initial release

  • Version 1_1: 2012-04-25

    Type: Database references