3TJW

Crystal Structure of Quasiracemic Villin Headpiece Subdomain Containing (F5Phe10) Substitution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.46 Å
  • R-Value Free: 0.190
  • R-Value Work: 0.150

Literature

Macromolecules
Sequence Display for 3TJW

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 8256.26

Macromolecule Entities
Molecule Chains Length Organism Details
L-Villin-1 B 34 Gallus gallus Fragment: headpiece subdomain (UNP residues 792-825)
Mutation: N27H
Gene Name(s): VIL1 Gene View VIL
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 17 Unique
ID Chains Type Formula 2D Diagram Parent
DLE
Query on DLE
A D-PEPTIDE LINKING C6 H13 N O2 --
DSN
Query on DSN
A D-PEPTIDE LINKING C3 H7 N O3 --
DAS
Query on DAS
A D-PEPTIDE LINKING C4 H7 N O4 --
DGL
Query on DGL
A D-PEPTIDE LINKING C5 H9 N O4 --
DPN
Query on DPN
A D-PEPTIDE LINKING C9 H11 N O2 --
DLY
Query on DLY
A D-PEPTIDE LINKING C6 H14 N2 O2 --
DAL
Query on DAL
A D-PEPTIDE LINKING C3 H7 N O2 --
DVA
Query on DVA
A D-PEPTIDE LINKING C5 H11 N O2 --
MED
Query on MED
A D-PEPTIDE LINKING C5 H11 N O2 S --
DTH
Query on DTH
A D-PEPTIDE LINKING C4 H9 N O3 --
DAR
Query on DAR
A D-PEPTIDE LINKING C6 H15 N4 O2 --
DSG
Query on DSG
A D-PEPTIDE LINKING C4 H8 N2 O3 --
DPR
Query on DPR
A D-PEPTIDE LINKING C5 H9 N O2 --
DTR
Query on DTR
A D-PEPTIDE LINKING C11 H12 N2 O2 --
DGN
Query on DGN
A D-PEPTIDE LINKING C5 H10 N2 O3 --
DHI
Query on DHI
A D-PEPTIDE LINKING C6 H10 N3 O2 --
PF5
Query on PF5
B L-PEPTIDE LINKING C9 H6 F5 N O2 PHE

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.46 Å
  • R-Value Free: 0.190
  • R-Value Work: 0.150
  • Space Group: F 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 38.66 α = 90.00
b = 88.11 β = 90.00
c = 88.66 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2011-08-25
  • Released Date: 2012-01-25
  • Deposition author(s): Mortenson, D.E., Satyshur, K.A., Gellman, S.H., Forest, K.T.

Revision History

  • Version 1_0: 2012-01-25

    Type: Initial release

  • Version 1_1: 2012-02-08

    Type: Database references

  • Version 1_2: 2012-02-22

    Type: Database references

  • Version 1_3: 2017-11-08

    Type: Refinement description