3MBE

TCR 21.30 in complex with MHC class II I-Ag7HEL(11-27)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.253

Literature

Macromolecules
Sequence Display for 3MBE

Classification: IMMUNE SYSTEM

Total Structure Weight: 203966.56

Macromolecule Entities
Molecule Chains Length Organism Details
MHC CLASS II H2-IAg7 ALPHA CHAIN A, E 190 Mus musculus Gene Name(s): H2-Aa
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
MHC CLASS II H2-IAg7 BETA CHAIN B, F 201 Mus musculus Gene Name(s): H2-Ab1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PEPTIDE HEL 11-27 P, Q 18 Gallus gallus EC#: 3.2.1.17 IUBMB
Mutation: A10G
Gene Name(s): LYZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
TCR 21.3 alpha chain C, G 229 Mus musculus Gene Name(s): Tcra
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
TCR 21.3 beta chain D, H 259 Mus musculus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, D, E, H N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.253
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 67.47 α = 90.00
b = 99.39 β = 90.00
c = 404.68 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2010-03-25
  • Released Date: 2010-05-12
  • Deposition author(s): Corper, A.L., Yoshida, K., Teyton, L., Wilson, I.A.

Revision History

  • Version 1_0: 2010-05-12

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2013-04-10

    Type: Structure summary

  • Version 1_3: 2013-05-15

    Type: Database references, Source and taxonomy

  • Version 1_4: 2018-01-24

    Type: Structure summary