3M18

Crystal structure of variable lymphocyte receptor VLRA.R2.1 in complex with hen egg lysozyme


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 3M18

Classification: IMMUNE SYSTEM

Total Structure Weight: 41892.04

Macromolecule Entities
Molecule Chains Length Organism Details
Variable lymphocyte receptor A diversity region A 251 Petromyzon marinus Fragment: Ectodomain
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Lysozyme C B 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Gene Name(s): LYZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.181
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 46.79 α = 90.00
b = 68.12 β = 110.94
c = 59.75 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2010-03-04
  • Released Date: 2010-06-30
  • Deposition author(s): Deng, L., Velikovsky, C.A., Mariuzza, R.A.

Revision History

  • Version 1_0: 2010-06-30

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance