1QJM

Crystal Structure of a Complex of Lactoferrin with a Lanthanide Ion (SM3+) at 3.4 Angstrom Resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.316
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 1QJM

Classification: LACTOFERRIN

Total Structure Weight: 75791.94

Macromolecule Entities
Molecule Chains Length Organism Details
LACTOFERRIN A 689 Equus caballus EC#: 3.4.21 IUBMB
Mutation: D223E, R269K, K290G, E294G, N295E, K296Q
Gene Name(s): LTF Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SM
Query on SM

A SAMARIUM (III) ION
Sm
DOSGOCSVHPUUIA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO3
Query on CO3

A CARBONATE ION
C O3
BVKZGUZCCUSVTD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.316
  • R-Value Work: 0.219
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 80.49 α = 90.00
b = 103.19 β = 90.00
c = 113.16 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-06-27
  • Released Date: 1999-08-26
  • Deposition author(s): Sharma, A.K., Singh, T.P.

Revision History

  • Version 1_0: 1999-08-26

    Type: Initial release

  • Version 1_1: 2016-12-28

    Type: Database references, Derived calculations, Other, Structure summary, Version format compliance

  • Version 1_2: 2017-07-05

    Type: Data collection

  • Version 1_3: 2019-04-03

    Type: Data collection, Experimental preparation