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X-RAY DIFFRACTION
Materials and Methods page
4KJ3
  •   Crystallization Hide
    Crystallization Experiments
    Method microbatch
    pH 6.5
    Temperature 291.0
    Details PEG8k, KSCN, pH 6.5, microbatch, temperature 291K
    Method microbatch
    pH 6.5
    Temperature 291.0
    Details PEG8k, KSCN, pH 6.5, microbatch, temperature 291K
    Method microbatch
    pH 6.5
    Temperature 291.0
    Details PEG8k, MPD, KSCN, pH 6.5, microbatch, temperature 291K
    Method microbatch
    pH 6.5
    Temperature 291.0
    Details PEG8k, MPD, KSCN, pH 6.5, microbatch, temperature 291K
    Method microbatch
    pH 6.5
    Temperature 291.0
    Details PEG8k, MPD, KSCN, pH 6.5, microbatch, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 361.6 α = 90
    b = 361.77 β = 103.57
    c = 433.2 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
    Diffrn ID 2
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 315
    Collection Date 2012-11-16
    Detector CCD
    Type ADSC QUANTUM 315
    Collection Date 2012-12-03
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ALS BEAMLINE 12.3.1
    Wavelength List 1.1
    Site ALS
    Beamline 12.3.1
    Source SYNCHROTRON
    Type ALS BEAMLINE 8.3.1
    Wavelength List 1.1
    Site ALS
    Beamline 8.3.1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.84
    Observed Criterion Sigma(I) 0.84
    Resolution(High) 2.9
    Resolution(Low) 70
    Number Reflections(Observed) 1874109
    Percent Possible(Observed) 83.7
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.9
    Resolution(Low) 70.0
    Cut-off Sigma(F) 0.52
    Number of Reflections(all) 2379999
    Number of Reflections(Observed) 1874109
    Number of Reflections(R-Free) 8386
    R-Work 0.2226
    R-Free 0.2715
     
    Temperature Factor Modeling
    Mean Isotropic B Value 41.9474
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 25408
    Nucleic Acid Atoms 63803
    Heterogen Atoms 144
    Solvent Atoms 660
     
     
  •   Software and Computing Hide
    Computing
    Data Collection XDS
    Data Reduction (intensity integration) XSCALE
    Data Reduction (data scaling) XSCALE
    Structure Solution PHASER
    Structure Refinement PHENIX
     
    Software
    data extraction pdb_extract version: 3.11
    refinement phenix
    molecular replacement Phaser
    data reduction Xscale