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X-RAY DIFFRACTION
Materials and Methods page
4JUO
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, SITTING DROP
    pH 6.5
    Temperature 293.0
    Details 3-4% isopropanol, 50 mM Na cacodylate, optimised mixture of salts, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 213.58 α = 90
    b = 213.58 β = 90
    c = 211.83 γ = 120
     
    Space Group
    Space Group Name:    H 3 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 315r
    Collection Date 2010-09-26
     
    Diffraction Radiation
    Monochromator Mirrors
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type DIAMOND BEAMLINE I03
    Wavelength List 0.97630
    Site DIAMOND
    Beamline I03
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) -1.0
    Observed Criterion Sigma(I) -1.0
    Resolution(High) 6.53
    Resolution(Low) 53.4
    Number Reflections(All) 3718
    Number Reflections(Observed) 3701
    Percent Possible(Observed) 99.24
    R Merge I(Observed) 0.06
    Redundancy 9.66
     
    High Resolution Shell Details
    Resolution(High) 6.53
    Resolution(Low) 6.71
    Percent Possible(All) 99.66
    R Merge I(Observed) 0.41
    Mean I Over Sigma(Observed) 1.88
    Redundancy 10.93
    Number Unique Reflections(All) 309
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 6.53
    Resolution(Low) 46.442
    Cut-off Sigma(F) 1.36
    Number of Reflections(all) 3718
    Number of Reflections(Observed) 3701
    Number of Reflections(R-Free) 169
    Percent Reflections(Observed) 99.14
    R-Factor(Observed) 0.2498
    R-Work 0.2474
    R-Free 0.2982
    R-Free Selection Details Random
     
    Temperature Factor Modeling
    Data Not Available
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    f_plane_restr 0.007
    f_chiral_restr 0.084
    f_dihedral_angle_d 18.67
    f_angle_d 1.491
    f_bond_d 0.017
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 7498
    Nucleic Acid Atoms 730
    Heterogen Atoms 28
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Collection GDE
    Data Reduction (intensity integration) Xia2/XDS
    Data Reduction (data scaling) Xia2/Scala
    Structure Solution Phaser
    Structure Refinement PHENIX (phenix.refine: 1.8_1069)
     
    Software
    refinement PHENIX version: (phenix.refine: 1.8_1069)
    model building Phaser
    data collection GDE