X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 37.43 α = 90
b = 53.61 β = 90
c = 157.96 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315 -- --
Diffraction Radiation
Monochromator Protocol
Cryogenically-cooled single crystal Si(220) side bounce SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 24-ID-E -- APS 24-ID-E

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.67 50.77 98.2 -- -- -- -- 37929 35377 -- 3.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.67 50.769 -- 0.03 37929 35375 2000 93.27 0.196 0.1686 0.1672 0.1915 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.67 1.7114 -- 126 2112 0.2431 0.2856 -- 84.0
X Ray Diffraction 1.7114 1.7577 -- 132 2184 0.2085 0.2673 -- 87.0
X Ray Diffraction 1.7577 1.8094 -- 133 2240 0.1958 0.2312 -- 89.0
X Ray Diffraction 1.8094 1.8678 -- 137 2288 0.175 0.2104 -- 90.0
X Ray Diffraction 1.8678 1.9346 -- 140 2320 0.1628 0.1939 -- 93.0
X Ray Diffraction 1.9346 2.012 -- 142 2375 0.1521 0.1722 -- 94.0
X Ray Diffraction 2.012 2.1036 -- 145 2422 0.166 0.1953 -- 95.0
X Ray Diffraction 2.1036 2.2145 -- 145 2419 0.1622 0.1944 -- 96.0
X Ray Diffraction 2.2145 2.3532 -- 147 2463 0.1714 0.1929 -- 96.0
X Ray Diffraction 2.3532 2.5349 -- 146 2433 0.1779 0.1904 -- 96.0
X Ray Diffraction 2.5349 2.79 -- 148 2477 0.1736 0.196 -- 97.0
X Ray Diffraction 2.79 3.1937 -- 150 2491 0.1625 0.1883 -- 96.0
X Ray Diffraction 3.1937 4.0234 -- 152 2532 0.1466 0.1664 -- 97.0
X Ray Diffraction 4.0234 50.7928 -- 157 2619 0.163 0.1791 -- 95.0
RMS Deviations
Key Refinement Restraint Deviation
f_plane_restr 0.006
f_chiral_restr 0.094
f_dihedral_angle_d 12.884
f_angle_d 1.257
f_bond_d 0.009
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2548
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 189

Software

Computing
Computing Package Purpose
ADSC Data Collection
PHENIX (phenix.refine: 1.8_1069) Structure Refinement
Software
Software Name Purpose
PHENIX version: (phenix.refine: 1.8_1069) refinement
ADSC data collection