X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 75.1 α = 90
b = 51.18 β = 101.75
c = 85.25 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315 -- --
Diffraction Radiation
Monochromator Protocol
Cryogenically-cooled single crystal Si(220) side bounce SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 24-ID-E -- APS 24-ID-E

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.56 83.46 97.2 -- -- -- -- -- 43962 -- 13.3 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.559 42.006 -- 1.35 43962 43890 1998 96.74 -- 0.1661 0.1647 0.196 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.559 1.5978 -- 141 2955 0.2473 0.2751 -- 96.0
X Ray Diffraction 1.5978 1.641 -- 139 2943 0.2396 0.2963 -- 95.0
X Ray Diffraction 1.641 1.6893 -- 141 2947 0.2335 0.2794 -- 95.0
X Ray Diffraction 1.6893 1.7438 -- 140 2929 0.2222 0.3028 -- 95.0
X Ray Diffraction 1.7438 1.8061 -- 139 2929 0.2134 0.2885 -- 96.0
X Ray Diffraction 1.8061 1.8784 -- 142 2949 0.2048 0.2168 -- 95.0
X Ray Diffraction 1.8784 1.9639 -- 141 2957 0.1868 0.2401 -- 96.0
X Ray Diffraction 1.9639 2.0675 -- 141 2980 0.1698 0.1984 -- 96.0
X Ray Diffraction 2.0675 2.197 -- 145 3019 0.1621 0.2133 -- 99.0
X Ray Diffraction 2.197 2.3666 -- 146 3060 0.1638 0.1979 -- 99.0
X Ray Diffraction 2.3666 2.6047 -- 143 3002 0.1663 0.2227 -- 98.0
X Ray Diffraction 2.6047 2.9816 -- 146 3071 0.1588 0.1881 -- 99.0
X Ray Diffraction 2.9816 3.7561 -- 146 3053 0.1424 0.1629 -- 98.0
X Ray Diffraction 3.7561 42.021 -- 148 3098 0.1443 0.1504 -- 97.0
RMS Deviations
Key Refinement Restraint Deviation
f_plane_restr 0.006
f_chiral_restr 0.103
f_dihedral_angle_d 13.281
f_angle_d 1.369
f_bond_d 0.009
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2456
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 358

Software

Computing
Computing Package Purpose
PHENIX (phenix.refine: 1.8_1069) Structure Refinement
Software
Software Name Purpose
PHENIX version: (phenix.refine: 1.8_1069) refinement