X-RAY DIFFRACTION Experimental Data & Validation


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Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 75.19 α = 90
b = 51.22 β = 101.6
c = 85.14 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315 -- --
Diffraction Radiation
Monochromator Protocol
Cryogenically-cooled single crystal Si(220) side bounce SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 24-ID-E -- APS 24-ID-E

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.48 83.4 97.6 -- -- -- -- 51805 51789 -- 16.5 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.478 36.825 -- 1.35 -- 51789 2000 97.36 -- 0.1426 0.1418 0.1628 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.478 1.5152 -- 139 3459 0.2378 0.2572 -- 94.0
X Ray Diffraction 1.5152 1.5561 -- 140 3486 0.2051 0.233 -- 97.0
X Ray Diffraction 1.5561 1.6019 -- 142 3534 0.1852 0.2314 -- 97.0
X Ray Diffraction 1.6019 1.6536 -- 141 3525 0.1692 0.1852 -- 97.0
X Ray Diffraction 1.6536 1.7127 -- 143 3550 0.1585 0.1868 -- 98.0
X Ray Diffraction 1.7127 1.7813 -- 143 3552 0.1506 0.1903 -- 98.0
X Ray Diffraction 1.7813 1.8624 -- 142 3562 0.1396 0.1759 -- 98.0
X Ray Diffraction 1.8624 1.9605 -- 145 3581 0.1338 0.1526 -- 98.0
X Ray Diffraction 1.9605 2.0834 -- 145 3599 0.1236 0.1509 -- 98.0
X Ray Diffraction 2.0834 2.2442 -- 143 3578 0.1281 0.1455 -- 98.0
X Ray Diffraction 2.2442 2.47 -- 144 3595 0.1339 0.1553 -- 99.0
X Ray Diffraction 2.47 2.8273 -- 145 3619 0.1369 0.1401 -- 98.0
X Ray Diffraction 2.8273 3.5616 -- 143 3563 0.137 0.1572 -- 97.0
X Ray Diffraction 3.5616 36.8365 -- 145 3586 0.1364 0.1562 -- 95.0
RMS Deviations
Key Refinement Restraint Deviation
f_plane_restr 0.006
f_chiral_restr 0.092
f_dihedral_angle_d 12.428
f_angle_d 1.251
f_bond_d 0.006
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2443
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 339

Software

Computing
Computing Package Purpose
ADSC Data Collection
PHENIX (phenix.refine: 1.8_1069) Structure Refinement
Software
Software Name Purpose
PHENIX version: (phenix.refine: 1.8_1069) refinement
ADSC data collection