X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 36.29 α = 90
b = 56.7 β = 90
c = 132.35 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315 -- --
Diffraction Radiation
Monochromator Protocol
Cryogenically-cooled single crystal Si(220) side bounce SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 24-ID-E -- APS 24-ID-E

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.44 66.18 96.8 -- -- -- -- 48875 48785 -- 15.6 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.439 31.823 -- 1.34 48875 48785 1997 96.47 -- 0.1783 0.1774 0.2007 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.439 1.4746 -- 106 2479 0.2889 0.2666 -- 74.0
X Ray Diffraction 1.4746 1.5144 -- 132 3130 0.2661 0.2747 -- 91.0
X Ray Diffraction 1.5144 1.559 -- 143 3345 0.2478 0.2764 -- 99.0
X Ray Diffraction 1.559 1.6093 -- 144 3377 0.2247 0.2361 -- 99.0
X Ray Diffraction 1.6093 1.6668 -- 145 3389 0.1996 0.2291 -- 99.0
X Ray Diffraction 1.6668 1.7335 -- 145 3403 0.1882 0.2525 -- 99.0
X Ray Diffraction 1.7335 1.8124 -- 146 3414 0.182 0.2066 -- 99.0
X Ray Diffraction 1.8124 1.908 -- 144 3401 0.1706 0.1989 -- 99.0
X Ray Diffraction 1.908 2.0275 -- 147 3423 0.1578 0.201 -- 99.0
X Ray Diffraction 2.0275 2.184 -- 146 3419 0.1575 0.1942 -- 99.0
X Ray Diffraction 2.184 2.4037 -- 148 3455 0.1673 0.2047 -- 99.0
X Ray Diffraction 2.4037 2.7514 -- 148 3460 0.1793 0.1816 -- 100.0
X Ray Diffraction 2.7514 3.4658 -- 150 3520 0.166 0.1946 -- 100.0
X Ray Diffraction 3.4658 31.8307 -- 153 3573 0.1706 0.182 -- 96.0
RMS Deviations
Key Refinement Restraint Deviation
f_plane_restr 0.009
f_chiral_restr 0.1
f_dihedral_angle_d 13.334
f_angle_d 1.471
f_bond_d 0.011
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2387
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 301

Software

Computing
Computing Package Purpose
ADSC Data Collection
PHENIX (phenix.refine: 1.8_1069) Structure Refinement
Software
Software Name Purpose
PHENIX version: (phenix.refine: 1.8_1069) refinement
ADSC data collection