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X-RAY DIFFRACTION
Materials and Methods page
4I8T
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 5
    Temperature 277.0
    Details 0.1 M PCTP buffer, 25 % w/v PEG 1500, 10 mM Spermidine, VAPOR DIFFUSION, HANGING DROP, temperature 277K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 75.51 α = 90
    b = 60.86 β = 113.47
    c = 80.35 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 315r
    Collection Date 2011-07-02
     
    Diffraction Radiation
    Monochromator Si(111) double crystal monochromator
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type DIAMOND BEAMLINE I02
    Wavelength List 0.979493
    Site DIAMOND
    Beamline I02
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 3
    Resolution(Low) 73.7
    Number Reflections(All) 22560
    Number Reflections(Observed) 6809
    Percent Possible(Observed) 99.9
    R Merge I(Observed) 0.18
    Redundancy 3.3
     
    High Resolution Shell Details
    Resolution(High) 3.0
    Resolution(Low) 3.21
    Percent Possible(All) 100.0
    R Merge I(Observed) 0.013
    Mean I Over Sigma(Observed) 0.9
    Redundancy 3.3
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 3.0
    Resolution(Low) 44.434
    Cut-off Sigma(F) 1.91
    Number of Reflections(Observed) 6799
    Number of Reflections(R-Free) 326
    Percent Reflections(Observed) 99.79
    R-Factor(Observed) 0.2412
    R-Work 0.2385
    R-Free 0.2934
     
    Temperature Factor Modeling
    Mean Isotropic B Value 104.51
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    f_plane_restr 0.001
    f_chiral_restr 0.042
    f_dihedral_angle_d 22.102
    f_angle_d 0.737
    f_bond_d 0.003
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1220
    Nucleic Acid Atoms 779
    Heterogen Atoms 0
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Collection GDA
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) Aimless
    Structure Solution PHASER
    Structure Refinement PHENIX (phenix.refine: 1.8_1069)
     
    Software
    data extraction pdb_extract version: 3.11
    refinement phenix
    molecular replacement Phaser version: 2.5.1
    data reduction AIMLESS version: 0.1.26
    data collection Mosflm