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X-RAY DIFFRACTION
Materials and Methods page
4I83
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 4.6
    Temperature 290.0
    Details 100mM Sodium Acetate, 7.5% PEG 4000, 10% Glycerol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 290K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 72.44 α = 90
    b = 103.98 β = 90
    c = 135.86 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector DIFFRACTOMETER
    Type ADSC QUANTUM 315r
    Collection Date 2012-08-24
     
    Diffraction Radiation
    Monochromator Silicon Double Crystal
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type AUSTRALIAN SYNCHROTRON BEAMLINE MX2
    Wavelength List 0.9537
    Site AUSTRALIAN SYNCHROTRON
    Beamline MX2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.5
    Resolution(Low) 44.73
    Number Reflections(All) 36282
    Number Reflections(Observed) 36282
    Percent Possible(Observed) 100.0
     
    High Resolution Shell Details
    Resolution(High) 2.5
    Resolution(Low) 2.61
    Percent Possible(All) 100.0
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.6
    Resolution(Low) 19.96
    Number of Reflections(all) 30670
    Number of Reflections(Observed) 30575
    Number of Reflections(R-Free) 1617
    Percent Reflections(Observed) 99.69
    R-Factor(Observed) 0.22523
    R-Work 0.22362
    R-Free 0.25589
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 51.202
    Anisotropic B[1][1] 0.05
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.02
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.02
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.6
    Shell Resolution(Low) 2.666
    Number of Reflections(R-Free) 132
    Number of Reflections(R-Work) 2194
    R-Factor(R-Work) 0.316
    R-Factor(R-Free) 0.366
    Percent Reflections(Observed) 99.91
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_other 0.005
    r_gen_planes_refined 0.008
    r_chiral_restr 0.088
    r_dihedral_angle_4_deg 14.086
    r_dihedral_angle_3_deg 18.04
    r_dihedral_angle_2_deg 36.473
    r_dihedral_angle_1_deg 6.305
    r_angle_other_deg 1.017
    r_angle_refined_deg 1.441
    r_bond_other_d 0.006
    r_bond_refined_d 0.011
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 6756
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Collection BluIce (McPhillips, 2002)
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) SCALA
    Structure Solution PHASER
    Structure Refinement REFMAC 5.7.0029
     
    Software
    refinement REFMAC version: 5.7.0029
    model building PHASER
    data collection 2002)
    data collection BluIce version: (McPhillips