X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 162.6 α = 90
b = 72.95 β = 100.7
c = 108.54 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 270 -- 2010-07-13
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON CHESS BEAMLINE F1 -- CHESS F1

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.7 43.01 -- -- -- -- -- -- 34228 -- -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.7004 43.015 -- 1.36 -- 34220 2000 99.04 -- 0.2146 0.2107 0.2768 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.7004 2.7679 -- 126 2040 0.3401 0.4231 -- 90.0
X Ray Diffraction 2.7679 2.8428 -- 142 2277 0.314 0.4297 -- 98.0
X Ray Diffraction 2.8428 2.9264 -- 143 2295 0.2969 0.3674 -- 99.0
X Ray Diffraction 2.9264 3.0208 -- 143 2310 0.2603 0.3783 -- 100.0
X Ray Diffraction 3.0208 3.1288 -- 142 2288 0.2422 0.3079 -- 100.0
X Ray Diffraction 3.1288 3.254 -- 143 2307 0.223 0.2888 -- 100.0
X Ray Diffraction 3.254 3.402 -- 144 2313 0.2241 0.3205 -- 100.0
X Ray Diffraction 3.402 3.5813 -- 145 2331 0.2256 0.3124 -- 100.0
X Ray Diffraction 3.5813 3.8056 -- 143 2305 0.2134 0.2775 -- 100.0
X Ray Diffraction 3.8056 4.0992 -- 144 2328 0.1937 0.3 -- 100.0
X Ray Diffraction 4.0992 4.5113 -- 145 2332 0.168 0.227 -- 100.0
X Ray Diffraction 4.5113 5.1632 -- 145 2331 0.167 0.2348 -- 100.0
X Ray Diffraction 5.1632 6.5014 -- 146 2354 0.2106 0.255 -- 100.0
X Ray Diffraction 6.5014 43.0205 -- 149 2409 0.1907 0.2057 -- 100.0
Temperature Factor Modeling
Temperature Factor Value
Anisotropic B[1][1] -4.5073
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] -8.7187
Anisotropic B[2][2] -4.0151
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 12.9243
RMS Deviations
Key Refinement Restraint Deviation
f_plane_restr 0.005
f_chiral_restr 0.078
f_dihedral_angle_d 17.467
f_angle_d 1.263
f_bond_d 0.009
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 7948
Nucleic Acid Atoms 0
Heterogen Atoms 36
Solvent Atoms 134

Software

Computing
Computing Package Purpose
HKL-2000 Data Collection
HKL-2000 Data Reduction (intensity integration)
HKL-2000 Data Reduction (data scaling)
PHENIX (phenix.refine: 1.7.1_743) Structure Solution
PHENIX (phenix.refine: 1.7.3_928) Structure Refinement
Software
Software Name Purpose
PHENIX version: (phenix.refine: 1.7.1_743) refinement
PHENIX version: (phenix.refine: 1.7.1_743) model building
HKL-2000 data collection