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X-RAY DIFFRACTION
Materials and Methods page
4HZ5
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7.5
    Temperature 277.0
    Details 20% PEG3350, 100mM Tris pH 7.5 200 mM ammonium phosphate, VAPOR DIFFUSION, HANGING DROP, temperature 277K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 144.21 α = 90
    b = 144.21 β = 90
    c = 84.17 γ = 120
     
    Space Group
    Space Group Name:    P 31
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type NOIR-1
    Collection Date 2008-02-02
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ALS BEAMLINE 4.2.2
    Site ALS
    Beamline 4.2.2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.7
    Resolution(Low) 50
    Number Reflections(Observed) 52510
    Percent Possible(Observed) 97.8
     
    High Resolution Shell Details
    Resolution(High) 2.7
    Resolution(Low) 2.8
    Percent Possible(All) 84.1
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.7
    Resolution(Low) 50.0
    Number of Reflections(all) 52542
    Number of Reflections(Observed) 49849
    Number of Reflections(R-Free) 2663
    Percent Reflections(Observed) 97.75
    R-Factor(All) 0.33
    R-Factor(Observed) 0.23361
    R-Work 0.23117
    R-Free 0.2796
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 52.152
    Anisotropic B[1][1] 2.4
    Anisotropic B[1][2] 1.2
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 2.4
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -3.61
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.701
    Shell Resolution(Low) 2.771
    Number of Reflections(R-Free) 165
    Number of Reflections(R-Work) 3073
    R-Factor(R-Work) 0.33
    R-Factor(R-Free) 0.396
    Percent Reflections(Observed) 81.01
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.003
    r_chiral_restr 0.075
    r_dihedral_angle_4_deg 12.727
    r_dihedral_angle_3_deg 16.422
    r_dihedral_angle_2_deg 35.105
    r_dihedral_angle_1_deg 5.007
    r_angle_refined_deg 1.138
    r_bond_refined_d 0.005
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 13272
    Nucleic Acid Atoms 0
    Heterogen Atoms 176
    Solvent Atoms 59
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117