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X-RAY DIFFRACTION
Materials and Methods page
4HYP
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, SITTING DROP
    pH 8
    Temperature 277.0
    Details 30% PEG4000, 200 mM MgCl2, 100 mM Tris , pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 48.41 α = 90
    b = 101.31 β = 101.6
    c = 82.28 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type NOIR-1
    Collection Date 2008-06-19
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ALS BEAMLINE 4.2.2
    Site ALS
    Beamline 4.2.2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.6
    Resolution(Low) 42.89
    Number Reflections(All) 93667
    Number Reflections(Observed) 23154
    Percent Possible(Observed) 96.4
     
    High Resolution Shell Details
    Resolution(High) 2.6
    Resolution(Low) 2.69
    Percent Possible(All) 96.8
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.6
    Resolution(Low) 42.89
    Number of Reflections(all) 93667
    Number of Reflections(Observed) 21938
    Number of Reflections(R-Free) 1188
    Percent Reflections(Observed) 96.3
    R-Factor(All) 0.255
    R-Factor(Observed) 0.20039
    R-Work 0.19515
    R-Free 0.29406
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 30.665
    Anisotropic B[1][1] 0.34
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.73
    Anisotropic B[2][2] -0.67
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.62
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.6
    Shell Resolution(Low) 2.668
    Number of Reflections(R-Free) 82
    Number of Reflections(R-Work) 1619
    R-Factor(R-Work) 0.255
    R-Factor(R-Free) 0.36
    Percent Reflections(Observed) 97.48
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.006
    r_chiral_restr 0.115
    r_dihedral_angle_4_deg 14.864
    r_dihedral_angle_3_deg 19.649
    r_dihedral_angle_2_deg 36.347
    r_dihedral_angle_1_deg 6.876
    r_angle_refined_deg 1.804
    r_bond_refined_d 0.012
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5992
    Nucleic Acid Atoms 0
    Heterogen Atoms 108
    Solvent Atoms 375
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117