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X-RAY DIFFRACTION
Materials and Methods page
4HU0
  •   Crystallization Hide
    Crystallization Experiments
    pH 6.5
    Temperature 291.0
    Details PEG 4000, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 136.92 α = 90
    b = 136.92 β = 90
    c = 136.92 γ = 90
     
    Space Group
    Space Group Name:    P 21 3
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 210
    Collection Date 2011-06-01
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type PAL/PLS BEAMLINE 6C1
    Wavelength 1.23985
    Site PAL/PLS
    Beamline 6C1
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.38
    Resolution(Low) 50
    Number Reflections(Observed) 34430
    Percent Possible(Observed) 100.0
     
    High Resolution Shell Details
    Resolution(High) 2.38
    Resolution(Low) 2.47
    Percent Possible(All) 99.6
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.38
    Resolution(Low) 43.3
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 34226
    Number of Reflections(R-Free) 1725
    Percent Reflections(Observed) 99.5
    R-Factor(Observed) 0.154
    R-Work 0.152
    R-Free 0.188
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 41.55
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.38
    Shell Resolution(Low) 2.44
    Number of Reflections(R-Free) 113
    Number of Reflections(R-Work) 2406
    R-Factor(R-Work) 0.231
    R-Factor(R-Free) 0.263
    Percent Reflections(Observed) 99.45
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 6.239
    r_scbond_it 4.133
    r_mcangle_it 2.349
    r_mcbond_it 1.339
    r_gen_planes_refined 0.014
    r_chiral_restr 0.175
    r_dihedral_angle_4_deg 20.628
    r_dihedral_angle_3_deg 16.613
    r_dihedral_angle_2_deg 38.068
    r_dihedral_angle_1_deg 7.316
    r_angle_refined_deg 2.528
    r_bond_refined_d 0.032
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2704
    Nucleic Acid Atoms 0
    Heterogen Atoms 81
    Solvent Atoms 271
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL
    Structure Solution AMORE
    Structure Refinement REFMAC 5.5.0109
     
    Software
    data extraction pdb_extract version: 3.11
    refinement REFMAC5 version: 5.5.0109
    molecular replacement AMORE
    data reduction HKL