POP-OUT | CLOSE
 
X-RAY DIFFRACTION
Materials and Methods page
4HTM
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6
    Temperature 295.0
    Details 100 mM MES, 150 mM zinc acetate, 3 M NaCl and 12% ethanol, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 21.48 α = 90
    b = 57.63 β = 94.58
    c = 23.07 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 76
     
    Diffraction Detector
    Detector CCD
    Type MARMOSAIC 225 mm CCD
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type APS BEAMLINE 21-ID-F
    Wavelength List 0.9786
    Site APS
    Beamline 21-ID-F
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.8
    Resolution(Low) 15
    Number Reflections(All) 19070
    Number Reflections(Observed) 2595
    Percent Possible(Observed) 99.4
     
    High Resolution Shell Details
    Resolution(High) 1.8
    Resolution(Low) 1.83
    Percent Possible(All) 100.0
    Mean I Over Sigma(Observed) 14.9
    R-Sym I(Observed) 0.134
    Redundancy 7.4
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method SAD
    reflnsShellList 2.0
    Resolution(Low) 14.41
    Number of Reflections(Observed) 1817
    Number of Reflections(R-Free) 81
    Percent Reflections(Observed) 98.91
    R-Factor(Observed) 0.24934
    R-Work 0.24791
    R-Free 0.28438
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 23.317
    Anisotropic B[1][1] -0.03
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.03
    Anisotropic B[2][2] -0.01
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.05
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.0
    Shell Resolution(Low) 2.051
    Number of Reflections(R-Free) 9
    Number of Reflections(R-Work) 125
    R-Factor(R-Work) 0.329
    R-Factor(R-Free) 0.329
    Percent Reflections(Observed) 100.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.001
    r_chiral_restr 0.044
    r_dihedral_angle_4_deg 1.685
    r_dihedral_angle_3_deg 14.891
    r_dihedral_angle_2_deg 22.94
    r_dihedral_angle_1_deg 3.137
    r_angle_refined_deg 0.707
    r_bond_refined_d 0.004
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 231
    Nucleic Acid Atoms 0
    Heterogen Atoms 3
    Solvent Atoms 27
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL-2000
    Structure Solution SHARP
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117
    model building SHARP