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X-RAY DIFFRACTION
Materials and Methods page
4HLI
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, SITTING DROP
    pH 7
    Temperature 293.0
    Details 0.04m sodium cacodylate buffer, 0.08M NaCCl, 0.12m KCl, 0.02m MgCl2, 0.012m spermine tetra hydrochloride, 35% MPD, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 25.17 α = 90
    b = 40.59 β = 90
    c = 65.4 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL
    Type DECTRIS PILATUS 2M-F
    Collection Date 2012-06-09
     
    Diffraction Radiation
    Monochromator BARTELS MONOCHROMATOR
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SLS BEAMLINE X06DA
    Wavelength 1.00067
    Wavelength List 1.000670
    Site SLS
    Beamline X06DA
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 2.0
    Observed Criterion Sigma(I) 4.0
    Resolution(High) 1.99
    Resolution(Low) 50
    Number Reflections(All) 4775
    Number Reflections(Observed) 4315
    Percent Possible(Observed) 96.5
    R Merge I(Observed) 0.038
    Redundancy 3.55
     
    High Resolution Shell Details
    Resolution(High) 1.99
    Resolution(Low) 2.11
    Percent Possible(All) 94.6
    R Merge I(Observed) 0.217
    Mean I Over Sigma(Observed) 5.81
    Redundancy 3.27
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.99
    Resolution(Low) 50.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 4775
    Number of Reflections(Observed) 4315
    Number of Reflections(R-Free) 334
    Percent Reflections(Observed) 96.5
    R-Factor(All) 0.2548
    R-Factor(Observed) 0.2518
    R-Work 0.2518
    R-Free 0.3281
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.0
    s_similar_adp_cmpnt 0.075
    s_rigid_bond_adp_cmpnt 0.0
    s_anti_bump_dis_restr 0.005
    s_non_zero_chiral_vol 0.006
    s_zero_chiral_vol 0.0
    s_from_restr_planes 5.0E-4
    s_similar_dist 0.0
    s_angle_d 0.073
    s_bond_d 0.007
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 0
    Nucleic Acid Atoms 490
    Heterogen Atoms 2
    Solvent Atoms 29
     
     
  •   Software and Computing Hide
    Computing
    Data Collection RemDAq
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) XDS
    Structure Solution PHASER
    Structure Refinement SHELXL-97
     
    Software
    refinement SHELXL-97
    model building PHASER
    data collection RemDAq