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X-RAY DIFFRACTION
Materials and Methods page
4HHO
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6.5
    Temperature 292.0
    Details 20% PEG 3350, 0.2M NaBr, 0.1M Bis-tris propane , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 93.78 α = 90
    b = 93.78 β = 90
    c = 145.16 γ = 90
     
    Space Group
    Space Group Name:    P 43 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 210
    Collection Date 2008-07-14
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID14-1
    Wavelength List 0.979
    Site ESRF
    Beamline ID14-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.1
    Resolution(Low) 46.89
    Number Reflections(All) 36561
    Number Reflections(Observed) 36561
    Percent Possible(Observed) 99.94
    R Merge I(Observed) 0.071
    B(Isotropic) From Wilson Plot 33.8
    Redundancy 9.3
     
    High Resolution Shell Details
    Resolution(High) 2.1
    Resolution(Low) 2.18
    Percent Possible(All) 100.0
    R Merge I(Observed) 0.574
    Mean I Over Sigma(Observed) 2.97
    R-Sym I(Observed) 0.591
    Redundancy 7.2
    Number Unique Reflections(All) 3785
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.1
    Resolution(Low) 46.89
    Number of Reflections(all) 36561
    Number of Reflections(Observed) 36561
    Number of Reflections(R-Free) 1925
    Percent Reflections(Observed) 99.94
    R-Factor(All) 0.18449
    R-Factor(Observed) 0.18449
    R-Work 0.18303
    R-Free 0.21243
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 33.802
    Anisotropic B[1][1] 0.0
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.0
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.0
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.1
    Shell Resolution(Low) 2.155
    Number of Reflections(R-Free) 122
    Number of Reflections(R-Work) 2415
    R-Factor(R-Work) 0.231
    R-Factor(R-Free) 0.277
    Percent Reflections(Observed) 99.72
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.013
    r_chiral_restr 0.204
    r_dihedral_angle_4_deg 20.722
    r_dihedral_angle_3_deg 15.027
    r_dihedral_angle_2_deg 35.786
    r_dihedral_angle_1_deg 7.493
    r_angle_refined_deg 2.335
    r_bond_refined_d 0.029
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2532
    Nucleic Acid Atoms 0
    Heterogen Atoms 28
    Solvent Atoms 171
     
     
  •   Software and Computing Hide
    Computing
    Data Collection HKL-2000
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution PHASER
    Structure Refinement REFMAC 5.6.0111
     
    Software
    refinement REFMAC version: 5.6.0111
    model building PHASER
    data collection HKL-2000