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X-RAY DIFFRACTION
Materials and Methods page
4HHL
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION
    pH 7
    Temperature 298.0
    Details PEG 3350, Mg acetate, pH 7, VAPOR DIFFUSION, temperature 298.0K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 110.8 α = 90
    b = 91.68 β = 119.65
    c = 84.61 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL
    Type PSI PILATUS 6M
    Collection Date 2011-11-13
     
    Diffraction Radiation
    Monochromator Si(111)
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID23-1
    Wavelength List 0.97946
    Site ESRF
    Beamline ID23-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 1.0
    Observed Criterion Sigma(I) 1.0
    Resolution(High) 1.73
    Resolution(Low) 48.14
    Number Reflections(All) 77187
    Number Reflections(Observed) 74395
    Percent Possible(Observed) 96.4
    Redundancy 3.7
     
    High Resolution Shell Details
    Resolution(High) 1.73
    Resolution(Low) 1.9
    Percent Possible(All) 93.4
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.73
    Resolution(Low) 48.14
    Number of Reflections(all) 70674
    Number of Reflections(Observed) 70674
    Number of Reflections(R-Free) 3720
    Percent Reflections(Observed) 100.0
    R-Factor(Observed) 0.13378
    R-Work 0.13094
    R-Free 0.18786
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 26.68
    Anisotropic B[1][1] 0.15
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.62
    Anisotropic B[2][2] 0.15
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.31
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.729
    Shell Resolution(Low) 1.774
    Number of Reflections(R-Free) 253
    Number of Reflections(R-Work) 4800
    R-Factor(R-Work) 0.194
    R-Factor(R-Free) 0.296
    Percent Reflections(Observed) 100.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_rigid_bond_restr 2.608
    r_scangle_it 7.236
    r_scbond_it 4.998
    r_mcangle_it 3.055
    r_mcbond_it 1.996
    r_gen_planes_refined 0.011
    r_chiral_restr 0.144
    r_dihedral_angle_4_deg 17.008
    r_dihedral_angle_3_deg 13.411
    r_dihedral_angle_2_deg 33.177
    r_dihedral_angle_1_deg 4.941
    r_angle_refined_deg 1.795
    r_bond_refined_d 0.024
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 6036
    Nucleic Acid Atoms 0
    Heterogen Atoms 57
    Solvent Atoms 366
     
     
  •   Software and Computing Hide
    Computing
    Data Collection ADSC Quantum
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) XSCALE
    Structure Solution Balbes
    Structure Refinement REFMAC 5.5.0109
     
    Software
    refinement REFMAC version: 5.5.0109
    model building Balbes
    data collection ADSC version: Quantum