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An Information Portal to 105212 Biological Macromolecular Structures

X-RAY DIFFRACTION
Materials and Methods page
4HHJ
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 8
    Temperature 291.0
    Details 0.1M Tris pH 8.0, 25% PEG 550 MME, VAPOR DIFFUSION, HANGING DROP, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 161.32 α = 90
    b = 177.61 β = 90
    c = 57.82 γ = 90
     
    Space Group
    Space Group Name:    C 2 2 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL
    Type PSI PILATUS 6M
    Collection Date 2010-08-16
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SLS BEAMLINE X10SA
    Wavelength List 1
    Site SLS
    Beamline X10SA
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.79
    Resolution(Low) 59.71
    Number Reflections(Observed) 78264
    Percent Possible(Observed) 99.9
    B(Isotropic) From Wilson Plot 28.67
    Redundancy 5.6
     
    High Resolution Shell Details
    Resolution(High) 1.79
    Resolution(Low) 1.84
    Percent Possible(All) 99.47
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.79
    Resolution(Low) 29.85
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 78264
    Number of Reflections(Observed) 78166
    Number of Reflections(R-Free) 3935
    Percent Reflections(Observed) 99.47
    R-Factor(All) 0.1783
    R-Factor(Observed) 0.1783
    R-Work 0.1767
    R-Free 0.2092
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 38.54
    Anisotropic B[1][1] -0.6031
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.7142
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.1111
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.79
    Shell Resolution(Low) 1.84
    Number of Reflections(R-Free) 294
    Number of Reflections(R-Work) 5149
    R-Factor(R-Work) 0.2415
    R-Factor(R-Free) 0.2544
    Percent Reflections(Observed) 99.47
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.01
    t_angle_deg 1.0
    t_omega_torsion 3.25
    t_other_torsion 16.82
     
    Coordinate Error
    Luzzati ESD(Observed) 0.191
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 4781
    Nucleic Acid Atoms 0
    Heterogen Atoms 42
    Solvent Atoms 661
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) SCALA
    Structure Solution MOLREP
    Structure Refinement BUSTER 2.10.0
     
    Software
    refinement BUSTER version: 2.10.0
    model building MOLREP