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X-RAY DIFFRACTION
Materials and Methods page
4HCV
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7.2
    Temperature 298.0
    Details 12% PEG3350, 0.1M Mg acetate, 0.1M Hepes , pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 37.36 α = 90
    b = 67.83 β = 105.57
    c = 49.09 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL
    Type DECTRIS PILATUS 6M
    Collection Date 2010-09-01
     
    Diffraction Radiation
    Monochromator mirror
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type APS BEAMLINE 17-ID
    Wavelength List 1.0
    Site APS
    Beamline 17-ID
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1.48
    Resolution(Low) 38.79
    Number Reflections(All) 124061
    Number Reflections(Observed) 36806
    Percent Possible(Observed) 93.8
    B(Isotropic) From Wilson Plot 16.02
     
    High Resolution Shell Details
    Resolution(High) 1.482
    Resolution(Low) 1.486
    Percent Possible(All) 70.0
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method FOURIER SYNTHESIS
    reflnsShellList 1.48
    Resolution(Low) 20.78
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 36772
    Number of Reflections(R-Free) 1842
    Percent Reflections(Observed) 93.46
    R-Factor(Observed) 0.1703
    R-Work 0.1695
    R-Free 0.1861
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 19.11
    Anisotropic B[1][1] -4.0146
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] -0.9053
    Anisotropic B[2][2] 2.3055
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 1.7091
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.48
    Shell Resolution(Low) 1.52
    Number of Reflections(R-Free) 124
    Number of Reflections(R-Work) 2325
    R-Factor(R-Work) 0.1707
    R-Factor(R-Free) 0.1794
    Percent Reflections(Observed) 93.46
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_other_torsion 16.05
    t_omega_torsion 3.84
    t_angle_deg 1.06
    t_bond_d 0.01
     
    Coordinate Error
    Luzzati ESD(Observed) 0.177
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2114
    Nucleic Acid Atoms 0
    Heterogen Atoms 38
    Solvent Atoms 166
     
     
  •   Software and Computing Hide
    Computing
    Data Collection autoPROC
    Data Reduction (intensity integration) autoPROC
    Data Reduction (data scaling) SCALA
    Structure Solution PHASER
    Structure Refinement BUSTER 2.11.2
     
    Software
    refinement BUSTER version: 2.11.2
    model building PHASER
    data collection autoPROC