X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Hanging Drop
Details hanging drop

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 126.12 α = 90
b = 30.35 β = 98.59
c = 72.47 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315r -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ALS BEAMLINE 5.0.3 1.0 ALS 5.0.3

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.6 50 -- -- -- -- -- -- 31114 -- -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.6 50.0 -- 3861.0 -- 31114 3094 85.4 -- -- 0.1811 0.2162 --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 31.9677
Anisotropic B[1][1] 2.355
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] -0.062
Anisotropic B[2][2] -2.822
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 0.467
RMS Deviations
Key Refinement Restraint Deviation
c_scangle_it 2.655
c_mcangle_it 2.461
c_scbond_it 1.759
c_mcbond_it 1.484
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 821
Nucleic Acid Atoms 814
Heterogen Atoms 2
Solvent Atoms 336

Software

Computing
Computing Package Purpose
CNS Structure Refinement
Software
Software Name Purpose
pdb_extract version: 3.11 data extraction
CNS refinement