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X-RAY DIFFRACTION
Materials and Methods page
4HAC
  •   Crystallization Hide
    Crystallization Experiments
    Method vapor diffusion, hanging drop
    pH 5.5
    Temperature 291.0
    Details PEG 3350, MgCl2, pH 5.5, vapor diffusion, hanging drop, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 97.29 α = 90
    b = 135.36 β = 90
    c = 45.87 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 210
    Collection Date 2012-07-12
     
    Diffraction Radiation
    Diffraction Protocol MAD
     
    Diffraction Source
    Source SYNCHROTRON
    Type OTHER
    Wavelength List 0.97947,0.97954,0.97179
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.91
    Resolution(Low) 50
    Number Reflections(Observed) 47072
    Percent Possible(Observed) 97.8
    R Merge I(Observed) 0.093
    Redundancy 6.9
     
    High Resolution Shell Details
    Resolution(High) 1.91
    Resolution(Low) 1.94
    Percent Possible(All) 72.2
    R Merge I(Observed) 0.709
    Redundancy 5.9
    Number Unique Reflections(All) 1688
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MAD
    reflnsShellList 1.92
    Resolution(Low) 40.93
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 47017
    Number of Reflections(R-Free) 2370
    Percent Reflections(Observed) 98.92
    R-Factor(Observed) 0.2137
    R-Work 0.2111
    R-Free 0.2628
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 41.5819
    Anisotropic B[1][1] -0.01
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.0
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.01
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.915
    Shell Resolution(Low) 1.965
    Number of Reflections(R-Free) 165
    Number of Reflections(R-Work) 3123
    R-Factor(R-Work) 0.337
    R-Factor(R-Free) 0.376
    Percent Reflections(Observed) 96.03
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 5.432
    r_scbond_it 3.385
    r_mcangle_it 2.052
    r_mcbond_it 1.2
    r_gen_planes_refined 0.01
    r_chiral_restr 0.153
    r_dihedral_angle_4_deg 17.41
    r_dihedral_angle_3_deg 18.061
    r_dihedral_angle_2_deg 36.944
    r_dihedral_angle_1_deg 6.597
    r_angle_refined_deg 1.95
    r_bond_refined_d 0.023
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 4537
    Nucleic Acid Atoms 0
    Heterogen Atoms 2
    Solvent Atoms 166
     
     
  •   Software and Computing Hide
    Computing
    Data Collection HKL-2000
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution SOLVE
    Structure Refinement REFMAC 5.5.0109
     
    Software
    data extraction pdb_extract version: 3.11
    refinement REFMAC5 version: 5.5.0109
    density modification RESOLVE
    phasing SOLVE
    data reduction HKL