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X-RAY DIFFRACTION
Materials and Methods page
4GSO
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6.7
    Temperature 291.0
    Details 0.1 M MES pH 6.7 and 30% PEG 550 MME, VAPOR DIFFUSION, HANGING DROP, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 84.53 α = 90
    b = 84.53 β = 90
    c = 80.24 γ = 90
     
    Space Group
    Space Group Name:    I 4
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type MARMOSAIC 225 mm CCD
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type LNLS BEAMLINE W01B-MX2
    Wavelength List 1.458
    Site LNLS
    Beamline W01B-MX2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.6
    Resolution(Low) 59.78
    Number Reflections(All) 8380
    Number Reflections(Observed) 8066
    Percent Possible(Observed) 96.25
     
    High Resolution Shell Details
    Resolution(High) 2.6
    Resolution(Low) 2.69
    Percent Possible(All) 91.0
    R Merge I(Observed) 0.339
    Redundancy 3.3
    Number Unique Reflections(All) 864
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.6
    Resolution(Low) 59.78
    Number of Reflections(all) 8380
    Number of Reflections(Observed) 8066
    Number of Reflections(R-Free) 397
    Percent Reflections(Observed) 96.25
    R-Factor(Observed) 0.21844
    R-Work 0.21592
    R-Free 0.26852
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 42.93
    Anisotropic B[1][1] -20.18
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -20.18
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 40.36
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.597
    Shell Resolution(Low) 2.664
    Number of Reflections(R-Free) 15
    Number of Reflections(R-Work) 548
    R-Factor(R-Work) 0.239
    R-Factor(R-Free) 0.532
    Percent Reflections(Observed) 85.43
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 1.678
    r_scbond_it 0.994
    r_mcangle_it 0.672
    r_mcbond_it 0.35
    r_gen_planes_refined 0.007
    r_chiral_restr 0.091
    r_dihedral_angle_4_deg 7.182
    r_dihedral_angle_3_deg 21.624
    r_dihedral_angle_2_deg 38.955
    r_dihedral_angle_1_deg 6.986
    r_angle_refined_deg 1.366
    r_bond_refined_d 0.009
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1762
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 7
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution MOLREP
    Structure Refinement REFMAC 5.5.0110
     
    Software
    refinement REFMAC version: 5.5.0110
    model building MOLREP