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X-RAY DIFFRACTION
Materials and Methods page
4GR2
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6
    Temperature 292.0
    Details 32% isopropanol, 100 mM MES , pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 45.27 α = 90
    b = 47.64 β = 90
    c = 140.91 γ = 90
     
    Space Group
    Space Group Name:    P 2 2 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU MICROMAX-007 HF
    Wavelength List 1.54
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2
    Resolution(Low) 19.73
    Number Reflections(All) 20075
    Number Reflections(Observed) 20075
    Percent Possible(Observed) 100.0
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.0
    Resolution(Low) 19.73
    Cut-off Sigma(F) 1.34
    Number of Reflections(Observed) 20069
    Number of Reflections(R-Free) 1035
    Percent Reflections(Observed) 93.99
    R-Factor(All) 0.2115
    R-Factor(Observed) 0.2115
    R-Work 0.209
    R-Free 0.2583
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.0
    Shell Resolution(Low) 2.1051
    Number of Reflections(R-Free) 128
    Number of Reflections(R-Work) 2597
    R-Factor(R-Work) 0.26
    R-Factor(R-Free) 0.3231
    Percent Reflections(Observed) 92.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.1051
    Shell Resolution(Low) 2.2368
    Number of Reflections(R-Free) 143
    Number of Reflections(R-Work) 2640
    R-Factor(R-Work) 0.2239
    R-Factor(R-Free) 0.279
    Percent Reflections(Observed) 93.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.2368
    Shell Resolution(Low) 2.4092
    Number of Reflections(R-Free) 147
    Number of Reflections(R-Work) 2658
    R-Factor(R-Work) 0.214
    R-Factor(R-Free) 0.2891
    Percent Reflections(Observed) 93.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.4092
    Shell Resolution(Low) 2.6512
    Number of Reflections(R-Free) 154
    Number of Reflections(R-Work) 2701
    R-Factor(R-Work) 0.2204
    R-Factor(R-Free) 0.258
    Percent Reflections(Observed) 94.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.6512
    Shell Resolution(Low) 3.0336
    Number of Reflections(R-Free) 175
    Number of Reflections(R-Work) 2706
    R-Factor(R-Work) 0.2176
    R-Factor(R-Free) 0.2879
    Percent Reflections(Observed) 95.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.0336
    Shell Resolution(Low) 3.8175
    Number of Reflections(R-Free) 148
    Number of Reflections(R-Work) 2789
    R-Factor(R-Work) 0.2069
    R-Factor(R-Free) 0.2885
    Percent Reflections(Observed) 95.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.8175
    Shell Resolution(Low) 19.7334
    Number of Reflections(R-Free) 140
    Number of Reflections(R-Work) 2943
    R-Factor(R-Work) 0.1951
    R-Factor(R-Free) 0.2083
    Percent Reflections(Observed) 95.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    f_plane_restr 0.004
    f_chiral_restr 0.075
    f_dihedral_angle_d 13.706
    f_angle_d 1.091
    f_bond_d 0.009
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1824
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 104
     
     
  •   Software and Computing Hide
    Computing
    Data Collection MAR345dtb
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) SCALA
    Structure Solution Phaser
    Structure Refinement PHENIX (phenix.refine: 1.8_1062)
     
    Software
    refinement PHENIX version: (phenix.refine: 1.8_1062)
    model building Phaser
    data collection MAR345dtb