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X-RAY DIFFRACTION
Materials and Methods page
4GLH
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7
    Temperature 298.0
    Details 0.04M sodium cacodylate buffer, 0.08M potassium chloride, 0.012M sodium chloride, 0.012M spermine tetra hydrochloride, 37% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 25.64 α = 90
    b = 41.77 β = 90
    c = 64 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL
    Type DECTRIS PILATUS 2M-F
    Collection Date 2012-06-09
     
    Diffraction Radiation
    Monochromator BARTELS MONOCHROMATOR
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SLS BEAMLINE X06DA
    Wavelength 1.00067
    Wavelength List 1.00067
    Site SLS
    Beamline X06DA
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 4.0
    Observed Criterion Sigma(I) 2.0
    Resolution(High) 1.66
    Resolution(Low) 41.78
    Number Reflections(All) 8542
    Number Reflections(Observed) 7781
    Percent Possible(Observed) 99.4
    R Merge I(Observed) 0.025
    Redundancy 3.61
     
    High Resolution Shell Details
    Resolution(High) 1.662
    Resolution(Low) 1.76
    Percent Possible(All) 99.0
    R Merge I(Observed) 0.202
    Mean I Over Sigma(Observed) 6.93
    Redundancy 3.71
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.662
    Resolution(Low) 41.78
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 8542
    Number of Reflections(Observed) 7781
    Number of Reflections(R-Free) 427
    Percent Reflections(Observed) 99.7
    R-Factor(All) 0.237
    R-Factor(Observed) 0.237
    R-Free 0.276
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.0
    s_similar_adp_cmpnt 0.0267
    s_rigid_bond_adp_cmpnt 0.0084
    s_anti_bump_dis_restr 0.008
    s_non_zero_chiral_vol 0.0082
    s_zero_chiral_vol 0.0
    s_from_restr_planes 0.0149
    s_similar_dist 0.0
    s_angle_d 0.0293
    s_bond_d 0.0087
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 0
    Nucleic Acid Atoms 490
    Heterogen Atoms 2
    Solvent Atoms 68
     
     
  •   Software and Computing Hide
    Computing
    Data Collection RemDAq
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) XDS
    Structure Solution PHASER
    Structure Refinement SHELXL-97
     
    Software
    refinement SHELXL-97
    model building PHASER
    data collection RemDAq