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X-RAY DIFFRACTION
Materials and Methods page
4GGL
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 5.6
    Temperature 293.0
    Details 25% (W/V) PEG 1500, 3% (V/V) T-BUTANOL, 20% (W/V) GLYCEROL, 20 MM CITRATE , pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 54.85 α = 90
    b = 58.58 β = 90
    c = 66.11 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type NOIR-1
    Collection Date 2009-07-04
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ALS BEAMLINE 4.2.2
    Site ALS
    Beamline 4.2.2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1.68
    Resolution(Low) 43.85
    Number Reflections(All) 90414
    Number Reflections(Observed) 23729
    Percent Possible(Observed) 95.4
     
    High Resolution Shell Details
    Resolution(High) 1.68
    Resolution(Low) 1.77
    Percent Possible(All) 95.4
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.69
    Resolution(Low) 43.85
    Number of Reflections(all) 90414
    Number of Reflections(Observed) 22473
    Number of Reflections(R-Free) 1219
    Percent Reflections(Observed) 96.31
    R-Factor(All) 0.267
    R-Factor(Observed) 0.17456
    R-Work 0.17308
    R-Free 0.20208
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 24.014
    Anisotropic B[1][1] -0.14
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.02
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.12
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.688
    Shell Resolution(Low) 1.731
    Number of Reflections(R-Free) 73
    Number of Reflections(R-Work) 1180
    R-Factor(R-Work) 0.267
    R-Factor(R-Free) 0.302
    Percent Reflections(Observed) 73.49
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.006
    r_chiral_restr 0.071
    r_dihedral_angle_4_deg 11.019
    r_dihedral_angle_3_deg 10.786
    r_dihedral_angle_2_deg 32.317
    r_dihedral_angle_1_deg 5.101
    r_angle_refined_deg 1.238
    r_bond_refined_d 0.006
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1524
    Nucleic Acid Atoms 0
    Heterogen Atoms 36
    Solvent Atoms 255
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117