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X-RAY DIFFRACTION
Materials and Methods page
4GER
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION
    pH 7.5
    Temperature 277.0
    Details 0.2 M magnesium chloride, 0.1 M HEPES, 25% PEG3350, pH 7.5, VAPOR DIFFUSION, temperature 277K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 61.01 α = 90
    b = 77.07 β = 103.16
    c = 64.05 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Detector
    Detector PIXEL
    Type PSI PILATUS 6M
    Collection Date 2011-08-23
     
    Diffraction Radiation
    Monochromator double crystal Si(111)
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SLS BEAMLINE X10SA
    Wavelength List 1.0
    Site SLS
    Beamline X10SA
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.59
    Resolution(Low) 48.94
    Number Reflections(All) 77582
    Number Reflections(Observed) 72131
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.59
    Resolution(Low) 48.94
    Number of Reflections(Observed) 68487
    Number of Reflections(R-Free) 3644
    Percent Reflections(Observed) 92.97
    R-Factor(Observed) 0.20184
    R-Work 0.19969
    R-Free 0.24279
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 14.586
    Anisotropic B[1][1] 1.16
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.25
    Anisotropic B[2][2] -0.66
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.38
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.59
    Shell Resolution(Low) 1.631
    Number of Reflections(R-Free) 251
    Number of Reflections(R-Work) 4527
    R-Factor(R-Work) 0.357
    R-Factor(R-Free) 0.411
    Percent Reflections(Observed) 84.55
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.013
    r_chiral_restr 0.148
    r_dihedral_angle_4_deg 15.626
    r_dihedral_angle_3_deg 14.23
    r_dihedral_angle_2_deg 33.716
    r_dihedral_angle_1_deg 6.219
    r_angle_refined_deg 2.052
    r_bond_refined_d 0.022
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 4580
    Nucleic Acid Atoms 0
    Heterogen Atoms 42
    Solvent Atoms 612
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement REFMAC 5.6.0119
     
    Software
    refinement REFMAC version: 5.6.0119