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X-RAY DIFFRACTION
Materials and Methods page
4FZY
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6.3
    Temperature 289.0
    Details 0.1M MES, 17% PEG6000, pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 289K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 37.28 α = 90
    b = 78.89 β = 90
    c = 146.67 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type MARMOSAIC 225 mm CCD
    Collection Date 2011-07-12
     
    Diffraction Radiation
    Monochromator GRAPHITE
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SSRF BEAMLINE BL17U
    Wavelength List 1.0000
    Site SSRF
    Beamline BL17U
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.5
    Resolution(Low) 30
    Number Reflections(Observed) 15314
    Percent Possible(Observed) 99.8
     
    High Resolution Shell Details
    Resolution(High) 2.5
    Resolution(Low) 2.59
    Percent Possible(All) 97.8
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.5
    Resolution(Low) 20.0
    Number of Reflections(all) 14545
    Number of Reflections(Observed) 14545
    Number of Reflections(R-Free) 768
    Percent Reflections(Observed) 97.62
    R-Factor(All) 0.22025
    R-Factor(Observed) 0.22023
    R-Work 0.21918
    R-Free 0.24076
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 24.068
    Anisotropic B[1][1] -1.66
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -2.46
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 4.12
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.497
    Shell Resolution(Low) 2.561
    Number of Reflections(R-Free) 58
    Number of Reflections(R-Work) 1009
    R-Factor(R-Work) 0.3
    R-Factor(R-Free) 0.377
    Percent Reflections(Observed) 97.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 5.186
    r_scbond_it 3.381
    r_mcangle_it 2.228
    r_mcbond_it 1.202
    r_gen_planes_refined 0.014
    r_chiral_restr 0.06
    r_dihedral_angle_4_deg 23.103
    r_dihedral_angle_3_deg 21.438
    r_dihedral_angle_2_deg 34.951
    r_dihedral_angle_1_deg 7.094
    r_angle_refined_deg 0.842
    r_bond_refined_d 0.009
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2647
    Nucleic Acid Atoms 472
    Heterogen Atoms 4
    Solvent Atoms 22
     
     
  •   Software and Computing Hide
    Computing
    Data Collection MAR345dtb
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution Molrep
    Structure Refinement REFMAC 5.5.0109
     
    Software
    refinement REFMAC version: 5.5.0109
    model building Molrep
    data collection MAR345dtb