X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 86.38 α = 90
b = 128.77 β = 90
c = 57.51 γ = 90
Symmetry
Space Group P 21 21 2

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
PIXEL DECTRIS PILATUS 6M -- 2011-03-11
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ESRF BEAMLINE ID29 0.97625 ESRF ID29

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.79 35.9 92.7 -- -- -- 3.2 61110 56650 1.0 1.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.79 35.9 -- -- 61110 53716 2882 92.42 -- 0.1951 0.19366 0.22172 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.79 1.836 -- 141 2668 0.264 0.329 -- 63.0
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 13.287
Anisotropic B[1][1] 1.13
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] -1.0
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -0.13
RMS Deviations
Key Refinement Restraint Deviation
r_scangle_it 2.382
r_scbond_it 1.487
r_mcangle_it 1.04
r_mcbond_other 0.132
r_mcbond_it 0.559
r_gen_planes_other 0.001
r_gen_planes_refined 0.004
r_chiral_restr 0.244
r_dihedral_angle_4_deg 17.88
r_dihedral_angle_3_deg 14.389
r_dihedral_angle_2_deg 32.535
r_dihedral_angle_1_deg 5.054
r_angle_other_deg 1.257
r_angle_refined_deg 1.189
r_bond_other_d 0.004
r_bond_refined_d 0.01
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 3942
Nucleic Acid Atoms 0
Heterogen Atoms 107
Solvent Atoms 626

Software

Computing
Computing Package Purpose
Pilatus Data Collection
MOSFLM Data Reduction (intensity integration)
SCALA Data Reduction (data scaling)
MolRep Structure Solution
REFMAC 5.5.0102 Structure Refinement
Software
Software Name Purpose
REFMAC version: 5.5.0102 refinement
MolRep model building
Pilatus data collection