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X-RAY DIFFRACTION
Materials and Methods page
4FYH
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7.6
    Temperature 291.0
    Details 100 mM Tris, 1.2 Li2SO4, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 291.K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 92.95 α = 90
    b = 119 β = 90
    c = 57.77 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 4
    Collection Date 2011-10-22
     
    Diffraction Radiation
    Monochromator Asymmetric Laue 001
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID14-2
    Wavelength List 0.9334
    Site ESRF
    Beamline ID14-2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 1.0
    Observed Criterion Sigma(I) 1.0
    Resolution(High) 2.44
    Number Reflections(All) 23302
    Percent Possible(Observed) 100.0
     
    High Resolution Shell Details
    Resolution(High) 2.44
    Resolution(Low) 2.57
    Percent Possible(All) 100.0
    R Merge I(Observed) 0.376
    Mean I Over Sigma(Observed) 5.0
    Redundancy 7.3
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.44
    Resolution(Low) 59.5
    Number of Reflections(all) 24582
    Number of Reflections(Observed) 23302
    Number of Reflections(R-Free) 1239
    Percent Reflections(Observed) 100.0
    R-Factor(Observed) 0.21093
    R-Work 0.20906
    R-Free 0.24645
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 29.815
    Anisotropic B[1][1] 0.24
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.46
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.21
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.44
    Shell Resolution(Low) 2.503
    Number of Reflections(R-Free) 91
    Number of Reflections(R-Work) 1683
    R-Factor(R-Work) 0.25
    R-Factor(R-Free) 0.314
    Percent Reflections(Observed) 100.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 1.989
    r_scbond_it 1.17
    r_mcangle_it 1.151
    r_mcbond_it 0.612
    r_gen_planes_refined 0.003
    r_chiral_restr 0.076
    r_dihedral_angle_4_deg 20.146
    r_dihedral_angle_3_deg 16.961
    r_dihedral_angle_2_deg 32.93
    r_dihedral_angle_1_deg 5.069
    r_angle_refined_deg 1.093
    r_bond_refined_d 0.01
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 4029
    Nucleic Acid Atoms 0
    Heterogen Atoms 133
    Solvent Atoms 123
     
     
  •   Software and Computing Hide
    Computing
    Data Collection ADSC Quantum
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) SCALA
    Structure Solution MolRep
    Structure Refinement REFMAC 5.5.0102
     
    Software
    refinement REFMAC version: 5.5.0102
    model building MolRep
    data collection ADSC version: Quantum