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X-RAY DIFFRACTION
Materials and Methods page
4FXJ
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7
    Temperature 290.0
    Details 10-16% PEG 3350, 100 mM sodium Cacodylate, 50 mM MgCl2, 100 mM KCl, VAPOR DIFFUSION, HANGING DROP, temperature 290K, pH 7
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 97.26 α = 90
    b = 70.6 β = 105.72
    c = 167.6 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE
    Type MAR scanner 345 mm plate
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU MICROMAX-007
    Wavelength List 1.54
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 2.9
    Observed Criterion Sigma(I) 2.9
    Resolution(High) 2.9
    Resolution(Low) 80.7
    Number Reflections(Observed) 44252
    Percent Possible(Observed) 90.3
    R Merge I(Observed) 0.167
    B(Isotropic) From Wilson Plot 50.2
    Redundancy 4.3
     
    High Resolution Shell Details
    Resolution(High) 2.9
    Resolution(Low) 3.06
    Percent Possible(All) 90.0
    R Merge I(Observed) 0.627
    Mean I Over Sigma(Observed) 2.2
    R-Sym I(Observed) 0.7
    Redundancy 4.3
    Number Unique Reflections(All) 27597
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.9
    Resolution(Low) 56.14
    Number of Reflections(Observed) 41633
    Number of Reflections(R-Free) 2211
    Percent Reflections(Observed) 89.39
    R-Factor(Observed) 0.24823
    R-Work 0.24562
    R-Free 0.2972
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 43.122
    Anisotropic B[1][1] 0.86
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] -0.76
    Anisotropic B[2][2] -0.15
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -1.12
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.9
    Shell Resolution(Low) 2.975
    Number of Reflections(R-Free) 140
    Number of Reflections(R-Work) 3011
    R-Factor(R-Work) 0.334
    R-Factor(R-Free) 0.386
    Percent Reflections(Observed) 87.99
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 0.114
    r_scbond_it 0.062
    r_mcangle_it 0.231
    r_mcbond_it 0.129
    r_gen_planes_refined 0.002
    r_chiral_restr 0.047
    r_dihedral_angle_4_deg 13.375
    r_dihedral_angle_3_deg 13.788
    r_dihedral_angle_2_deg 34.865
    r_dihedral_angle_1_deg 3.539
    r_angle_refined_deg 0.773
    r_bond_refined_d 0.005
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 14721
    Nucleic Acid Atoms 0
    Heterogen Atoms 73
    Solvent Atoms 103
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (data scaling) SCALA
    Structure Refinement REFMAC 5.5.0109
     
    Software
    refinement REFMAC version: 5.5.0109