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An Information Portal to 105212 Biological Macromolecular Structures

X-RAY DIFFRACTION
Materials and Methods page
4FWI
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 11
    Temperature 291.0
    Details 4%(v/v) 2-propanol, 0.05M capso, 12.25%(w/v) PEG MME5000, 12.5% glycerol, pH 11.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 64.25 α = 90
    b = 64.25 β = 90
    c = 320.61 γ = 90
     
    Space Group
    Space Group Name:    P 43 2 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 315
    Collection Date 2010-11-06
     
    Diffraction Radiation
    Monochromator Mirror
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SSRF BEAMLINE BL17U
    Wavelength List 0.9793
    Site SSRF
    Beamline BL17U
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.89
    Resolution(Low) 50
    Number Reflections(Observed) 15715
    Percent Possible(Observed) 97.5
     
    High Resolution Shell Details
    Resolution(High) 2.89
    Resolution(Low) 2.99
    Percent Possible(All) 90.3
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method SAD
    reflnsShellList 2.892
    Resolution(Low) 41.809
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 15549
    Number of Reflections(Observed) 14810
    Number of Reflections(R-Free) 739
    Percent Reflections(Observed) 92.36
    R-Factor(Observed) 0.2146
    R-Work 0.2119
    R-Free 0.2679
     
    Temperature Factor Modeling
    Mean Isotropic B Value 68.6704
    Anisotropic B[1][1] 6.8956
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 6.8956
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -13.7912
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.8919
    Shell Resolution(Low) 3.1151
    Number of Reflections(R-Free) 136
    Number of Reflections(R-Work) 2351
    R-Factor(R-Work) 0.3439
    R-Factor(R-Free) 0.4282
    Percent Reflections(Observed) 80.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.1151
    Shell Resolution(Low) 3.4284
    Number of Reflections(R-Free) 127
    Number of Reflections(R-Work) 2620
    R-Factor(R-Work) 0.2532
    R-Factor(R-Free) 0.2998
    Percent Reflections(Observed) 88.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.4284
    Shell Resolution(Low) 3.9242
    Number of Reflections(R-Free) 165
    Number of Reflections(R-Work) 2848
    R-Factor(R-Work) 0.1923
    R-Factor(R-Free) 0.2684
    Percent Reflections(Observed) 95.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.9242
    Shell Resolution(Low) 4.9428
    Number of Reflections(R-Free) 152
    Number of Reflections(R-Work) 3018
    R-Factor(R-Work) 0.1681
    R-Factor(R-Free) 0.2082
    Percent Reflections(Observed) 98.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 4.9428
    Shell Resolution(Low) 41.8131
    Number of Reflections(R-Free) 159
    Number of Reflections(R-Work) 3234
    R-Factor(R-Work) 0.2193
    R-Factor(R-Free) 0.273
    Percent Reflections(Observed) 99.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    f_dihedral_angle_d 20.334
    f_plane_restr 0.005
    f_chiral_restr 0.085
    f_angle_d 1.477
    f_bond_d 0.015
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2425
    Nucleic Acid Atoms 0
    Heterogen Atoms 40
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Collection HKL-2000
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution SHELXS
    Structure Refinement PHENIX (phenix.refine: 1.7_650)
     
    Software
    refinement PHENIX version: (phenix.refine: 1.7_650)
    model building SHELXS
    data collection HKL-2000