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X-RAY DIFFRACTION
Materials and Methods page
4FOU
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, SITTING DROP
    pH 7.5
    Temperature 291.0
    Details 18% PEG4000, 0.1 M Tris, pH 7.5, 0.2 M calcium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 126.79 α = 90
    b = 126.79 β = 90
    c = 107.32 γ = 120
     
    Space Group
    Space Group Name:    P 65
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type MARMOSAIC 225 mm CCD
    Collection Date 2011-11-24
     
    Diffraction Radiation
    Monochromator double flat crystal Si(111)
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type LNLS BEAMLINE W01B-MX2
    Wavelength List 1.459
    Site LNLS
    Beamline W01B-MX2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.1
    Resolution(Low) 50
    Number Reflections(All) 57146
    Number Reflections(Observed) 57146
    Percent Possible(Observed) 99.7
    Redundancy 10.5
     
    High Resolution Shell Details
    Resolution(High) 2.1
    Resolution(Low) 2.18
    Percent Possible(All) 99.1
    Mean I Over Sigma(Observed) 3.86
    R-Sym I(Observed) 0.589
    Redundancy 8.5
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.1
    Resolution(Low) 41.5
    Number of Reflections(all) 54199
    Number of Reflections(Observed) 54199
    Number of Reflections(R-Free) 2858
    Percent Reflections(Observed) 99.56
    R-Factor(Observed) 0.18908
    R-Work 0.18647
    R-Free 0.23819
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 39.457
    Anisotropic B[1][1] -0.71
    Anisotropic B[1][2] -0.35
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.71
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 1.06
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.1
    Shell Resolution(Low) 2.152
    Number of Reflections(R-Free) 201
    Number of Reflections(R-Work) 3977
    R-Factor(R-Work) 0.243
    R-Factor(R-Free) 0.272
    Percent Reflections(Observed) 98.26
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 3.718
    r_scbond_it 2.392
    r_mcangle_it 1.812
    r_mcbond_other 0.209
    r_mcbond_it 1.003
    r_gen_planes_other 0.002
    r_gen_planes_refined 0.008
    r_chiral_restr 0.091
    r_dihedral_angle_4_deg 19.003
    r_dihedral_angle_3_deg 16.348
    r_dihedral_angle_2_deg 36.679
    r_dihedral_angle_1_deg 6.014
    r_angle_other_deg 0.929
    r_angle_refined_deg 1.529
    r_bond_other_d 0.001
    r_bond_refined_d 0.016
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5559
    Nucleic Acid Atoms 0
    Heterogen Atoms 113
    Solvent Atoms 363
     
     
  •   Software and Computing Hide
    Computing
    Data Collection HKL-2000
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution Phaser
    Structure Refinement REFMAC 5.5.0110
     
    Software
    refinement REFMAC version: 5.5.0110
    model building Phaser
    data collection HKL-2000