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X-RAY DIFFRACTION
Materials and Methods page
4ELE
  •   Crystallization Hide
    Crystallization Experiments
    pH 5.8
    Temperature 298.0
    Details 16-22% PEG 3350, 0.2M CaCl2, 0.1M MES, +/- 3% glycerol , pH 5.8, VAPOR DIFFUSION, SITTING DROP, temperature 298K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 68.54 α = 90
    b = 136.3 β = 90
    c = 168.55 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Detector
    Detector CCD
    Type Bruker Platinum 135
    Collection Date 2010-11-01
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type BRUKER AXS MICROSTAR
    Wavelength 1.54
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.35
    Resolution(Low) 29.1
    Number Reflections(Observed) 64869
    Percent Possible(Observed) 97.0
    B(Isotropic) From Wilson Plot 18.3
    Redundancy 5.1
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.35
    Resolution(Low) 28.09
    Cut-off Sigma(F) 1.49
    Number of Reflections(Observed) 64834
    Number of Reflections(R-Free) 3263
    Percent Reflections(Observed) 97.4
    R-Factor(Observed) 0.2
    R-Work 0.197
    R-Free 0.253
     
    Temperature Factor Modeling
    Anisotropic B[1][1] 7.1076
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -3.0115
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -4.0961
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.3501
    Shell Resolution(Low) 2.3852
    Number of Reflections(R-Free) 111
    Number of Reflections(R-Work) 1968
    R-Factor(R-Work) 0.257
    R-Factor(R-Free) 0.3282
    Percent Reflections(Observed) 73.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.3852
    Shell Resolution(Low) 2.4224
    Number of Reflections(R-Free) 119
    Number of Reflections(R-Work) 2611
    R-Factor(R-Work) 0.2523
    R-Factor(R-Free) 0.3379
    Percent Reflections(Observed) 96.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.4224
    Shell Resolution(Low) 2.4621
    Number of Reflections(R-Free) 135
    Number of Reflections(R-Work) 2664
    R-Factor(R-Work) 0.242
    R-Factor(R-Free) 0.2962
    Percent Reflections(Observed) 98.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.4621
    Shell Resolution(Low) 2.5045
    Number of Reflections(R-Free) 147
    Number of Reflections(R-Work) 2685
    R-Factor(R-Work) 0.2434
    R-Factor(R-Free) 0.3258
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.5045
    Shell Resolution(Low) 2.55
    Number of Reflections(R-Free) 149
    Number of Reflections(R-Work) 2721
    R-Factor(R-Work) 0.238
    R-Factor(R-Free) 0.309
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.55
    Shell Resolution(Low) 2.5991
    Number of Reflections(R-Free) 139
    Number of Reflections(R-Work) 2711
    R-Factor(R-Work) 0.2326
    R-Factor(R-Free) 0.2967
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.5991
    Shell Resolution(Low) 2.6521
    Number of Reflections(R-Free) 150
    Number of Reflections(R-Work) 2707
    R-Factor(R-Work) 0.2271
    R-Factor(R-Free) 0.2731
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.6521
    Shell Resolution(Low) 2.7097
    Number of Reflections(R-Free) 162
    Number of Reflections(R-Work) 2708
    R-Factor(R-Work) 0.2344
    R-Factor(R-Free) 0.3329
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.7097
    Shell Resolution(Low) 2.7727
    Number of Reflections(R-Free) 157
    Number of Reflections(R-Work) 2706
    R-Factor(R-Work) 0.2233
    R-Factor(R-Free) 0.3051
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.7727
    Shell Resolution(Low) 2.8419
    Number of Reflections(R-Free) 135
    Number of Reflections(R-Work) 2720
    R-Factor(R-Work) 0.2172
    R-Factor(R-Free) 0.3121
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.8419
    Shell Resolution(Low) 2.9187
    Number of Reflections(R-Free) 142
    Number of Reflections(R-Work) 2684
    R-Factor(R-Work) 0.2008
    R-Factor(R-Free) 0.2685
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.9187
    Shell Resolution(Low) 3.0045
    Number of Reflections(R-Free) 141
    Number of Reflections(R-Work) 2731
    R-Factor(R-Work) 0.2062
    R-Factor(R-Free) 0.2736
    Percent Reflections(Observed) 100.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.0045
    Shell Resolution(Low) 3.1014
    Number of Reflections(R-Free) 131
    Number of Reflections(R-Work) 2731
    R-Factor(R-Work) 0.201
    R-Factor(R-Free) 0.2583
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.1014
    Shell Resolution(Low) 3.212
    Number of Reflections(R-Free) 129
    Number of Reflections(R-Work) 2720
    R-Factor(R-Work) 0.2023
    R-Factor(R-Free) 0.2646
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.212
    Shell Resolution(Low) 3.3405
    Number of Reflections(R-Free) 161
    Number of Reflections(R-Work) 2705
    R-Factor(R-Work) 0.1944
    R-Factor(R-Free) 0.2729
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.3405
    Shell Resolution(Low) 3.4922
    Number of Reflections(R-Free) 139
    Number of Reflections(R-Work) 2724
    R-Factor(R-Work) 0.2022
    R-Factor(R-Free) 0.2534
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.4922
    Shell Resolution(Low) 3.676
    Number of Reflections(R-Free) 130
    Number of Reflections(R-Work) 2730
    R-Factor(R-Work) 0.2004
    R-Factor(R-Free) 0.2383
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.676
    Shell Resolution(Low) 3.9057
    Number of Reflections(R-Free) 141
    Number of Reflections(R-Work) 2722
    R-Factor(R-Work) 0.1821
    R-Factor(R-Free) 0.2393
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.9057
    Shell Resolution(Low) 4.2064
    Number of Reflections(R-Free) 148
    Number of Reflections(R-Work) 2730
    R-Factor(R-Work) 0.1578
    R-Factor(R-Free) 0.2098
    Percent Reflections(Observed) 99.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 4.2064
    Shell Resolution(Low) 4.628
    Number of Reflections(R-Free) 146
    Number of Reflections(R-Work) 2718
    R-Factor(R-Work) 0.1428
    R-Factor(R-Free) 0.1842
    Percent Reflections(Observed) 98.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 4.628
    Shell Resolution(Low) 5.2938
    Number of Reflections(R-Free) 161
    Number of Reflections(R-Work) 2723
    R-Factor(R-Work) 0.1443
    R-Factor(R-Free) 0.1725
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 5.2938
    Shell Resolution(Low) 6.6549
    Number of Reflections(R-Free) 158
    Number of Reflections(R-Work) 2718
    R-Factor(R-Work) 0.2052
    R-Factor(R-Free) 0.226
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 6.6549
    Shell Resolution(Low) 28.0943
    Number of Reflections(R-Free) 132
    Number of Reflections(R-Work) 2734
    R-Factor(R-Work) 0.1957
    R-Factor(R-Free) 0.249
    Percent Reflections(Observed) 92.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    f_plane_restr 0.005
    f_chiral_restr 0.07
    f_dihedral_angle_d 17.669
    f_angle_d 1.106
    f_bond_d 0.008
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 11034
    Nucleic Acid Atoms 0
    Heterogen Atoms 304
    Solvent Atoms 1033
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement PHENIX (PHENIX.REFINE: 1.7.2_869)
     
    Software
    refinement PHENIX version: (phenix.refine: 1.7.2_869)