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X-RAY DIFFRACTION
Materials and Methods page
4EIZ
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, SITTING DROP
    pH 5.6
    Temperature 293.0
    Details 25.5% PEG4000, 0.085M NaCitrate, 0.17 M Ammonium Sulphate, 25% Glycerol, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 101.36 α = 90
    b = 77.52 β = 91.28
    c = 93.47 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 315r
    Collection Date 2007-12-15
     
    Diffraction Radiation
    Monochromator Si 111 CHANNEL
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID23-1
    Wavelength List 0.978
    Site ESRF
    Beamline ID23-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.2
    Resolution(Low) 20
    Number Reflections(All) 36808
    Number Reflections(Observed) 35739
    Percent Possible(Observed) 97.1
     
    High Resolution Shell Details
    Resolution(High) 2.2
    Resolution(Low) 2.5
    Percent Possible(All) 97.1
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.2
    Resolution(Low) 19.989
    Cut-off Sigma(F) 1.34
    Number of Reflections(Observed) 35718
    Number of Reflections(R-Free) 1772
    Percent Reflections(Observed) 96.96
    R-Factor(Observed) 0.1733
    R-Work 0.1705
    R-Free 0.2242
     
    Temperature Factor Modeling
    Anisotropic B[1][1] -2.5217
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 10.8113
    Anisotropic B[2][2] 4.819
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -2.2973
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.2
    Shell Resolution(Low) 2.2587
    Number of Reflections(R-Free) 113
    Number of Reflections(R-Work) 2573
    R-Factor(R-Work) 0.1831
    R-Factor(R-Free) 0.253
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.2587
    Shell Resolution(Low) 2.325
    Number of Reflections(R-Free) 130
    Number of Reflections(R-Work) 2610
    R-Factor(R-Work) 0.1856
    R-Factor(R-Free) 0.2591
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.325
    Shell Resolution(Low) 2.3999
    Number of Reflections(R-Free) 128
    Number of Reflections(R-Work) 2585
    R-Factor(R-Work) 0.1927
    R-Factor(R-Free) 0.2834
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.3999
    Shell Resolution(Low) 2.4856
    Number of Reflections(R-Free) 150
    Number of Reflections(R-Work) 2615
    R-Factor(R-Work) 0.1851
    R-Factor(R-Free) 0.2721
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.4856
    Shell Resolution(Low) 2.5849
    Number of Reflections(R-Free) 117
    Number of Reflections(R-Work) 2614
    R-Factor(R-Work) 0.1837
    R-Factor(R-Free) 0.2534
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.5849
    Shell Resolution(Low) 2.7023
    Number of Reflections(R-Free) 125
    Number of Reflections(R-Work) 2597
    R-Factor(R-Work) 0.1907
    R-Factor(R-Free) 0.297
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.7023
    Shell Resolution(Low) 2.8444
    Number of Reflections(R-Free) 109
    Number of Reflections(R-Work) 2636
    R-Factor(R-Work) 0.1962
    R-Factor(R-Free) 0.2951
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.8444
    Shell Resolution(Low) 3.022
    Number of Reflections(R-Free) 148
    Number of Reflections(R-Work) 2616
    R-Factor(R-Work) 0.1864
    R-Factor(R-Free) 0.2521
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.022
    Shell Resolution(Low) 3.2544
    Number of Reflections(R-Free) 165
    Number of Reflections(R-Work) 2567
    R-Factor(R-Work) 0.1879
    R-Factor(R-Free) 0.2612
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.2544
    Shell Resolution(Low) 3.5802
    Number of Reflections(R-Free) 151
    Number of Reflections(R-Work) 2613
    R-Factor(R-Work) 0.1709
    R-Factor(R-Free) 0.2048
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.5802
    Shell Resolution(Low) 4.0944
    Number of Reflections(R-Free) 133
    Number of Reflections(R-Work) 2641
    R-Factor(R-Work) 0.1501
    R-Factor(R-Free) 0.1954
    Percent Reflections(Observed) 98.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 4.0944
    Shell Resolution(Low) 5.144
    Number of Reflections(R-Free) 150
    Number of Reflections(R-Work) 2612
    R-Factor(R-Work) 0.127
    R-Factor(R-Free) 0.1637
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 5.144
    Shell Resolution(Low) 19.9896
    Number of Reflections(R-Free) 153
    Number of Reflections(R-Work) 2667
    R-Factor(R-Work) 0.1791
    R-Factor(R-Free) 0.1999
    Percent Reflections(Observed) 97.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    f_plane_restr 0.006
    f_chiral_restr 0.076
    f_dihedral_angle_d 13.239
    f_angle_d 1.106
    f_bond_d 0.009
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 4432
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 358
     
     
  •   Software and Computing Hide
    Computing
    Data Collection ADSC Quantum
    Data Reduction (intensity integration) DENZO
    Data Reduction (data scaling) SCALEPACK
    Structure Solution PHASER
    Structure Refinement PHENIX (phenix.refine: 1.7.3_928)
     
    Software
    refinement PHENIX version: (phenix.refine: 1.7.3_928)
    model building PHASER
    data collection ADSC version: Quantum