X-RAY DIFFRACTION Experimental Data & Validation


Lost? View more X-Ray Crystallographic info.

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 103.58 α = 90
b = 103.58 β = 90
c = 270.21 γ = 90
Symmetry
Space Group P 41 21 2

Diffraction

Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 17-BM 1.0 APS 17-BM

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.5 48.36 99.9 0.15 -- -- -- 51996 51996 2.0 2.0 48.55

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
FOURIER SYNTHESIS 2.5 39.0 -- 0.0 -- 51805 2590 99.89 -- 0.1932 0.192 0.216 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.5 2.56 -- 190 3528 0.2404 0.2827 -- 99.89
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 37.82
Anisotropic B[1][1] -2.8261
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] -2.8261
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 5.6522
RMS Deviations
Key Refinement Restraint Deviation
t_bond_d 0.009
t_angle_deg 0.99
t_omega_torsion 2.56
t_other_torsion 18.02
Coordinate Error
Parameter Value
Luzzati ESD (Observed) 0.327
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 5412
Nucleic Acid Atoms 0
Heterogen Atoms 62
Solvent Atoms 313

Software

Computing
Computing Package Purpose
BUSTER 2.11.2 Structure Refinement
Software
Software Name Purpose
BUSTER version: 2.11.2 refinement