POP-OUT | CLOSE
 
X-RAY DIFFRACTION
Materials and Methods page
4BXX
  •   Crystallization Hide
    Crystallization Experiments
    pH 7
    Details 5-7% PEG6000, 50 MM HEPES PH 7.0, 300 MM SODIUM ACETATE, 5 MM TCEP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293 K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 222.92 α = 90
    b = 392.67 β = 90
    c = 281.04 γ = 90
     
    Space Group
    Space Group Name:    C 2 2 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL (PILATUS 6M)
    Type DECTRIS
    Collection Date 2011-12-05
     
    Diffraction Radiation
    Monochromator FIXED-EXIT LN2 COOLED DOUBLE CRYSTAL MONOCHROMATOR SI(111)
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SLS BEAMLINE X06SA
    Wavelength 0.91887
    Site SLS
    Beamline X06SA
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 3.28
    Resolution(Low) 49.08
    Number Reflections(Observed) 187168
    Percent Possible(Observed) 100.0
    R Merge I(Observed) 0.01
    B(Isotropic) From Wilson Plot 98.21
    Redundancy 7.66
     
    High Resolution Shell Details
    Resolution(High) 3.28
    Resolution(Low) 3.37
    Percent Possible(All) 100.0
    Mean I Over Sigma(Observed) 1.52
    Redundancy 7.49
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 3.28
    Resolution(Low) 49.08
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 187166
    Number of Reflections(R-Free) 3698
    Percent Reflections(Observed) 99.98
    R-Factor(Observed) 0.1803
    R-Work 0.1798
    R-Free 0.2077
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 120.5
    Anisotropic B[1][1] 18.4423
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 22.2444
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -40.6868
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.28
    Shell Resolution(Low) 3.37
    Number of Reflections(R-Free) 267
    Number of Reflections(R-Work) 13483
    R-Factor(R-Work) 0.2571
    R-Factor(R-Free) 0.2867
    Percent Reflections(Observed) 99.98
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.01
    t_angle_deg 1.29
    t_omega_torsion 2.96
    t_other_torsion 23.86
     
    Coordinate Error
    Luzzati ESD(Observed) 0.795
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 32031
    Nucleic Acid Atoms 716
    Heterogen Atoms 9
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) XSCALE
    Structure Refinement BUSTER 2.11.5
     
    Software
    refinement BUSTER version: 2.11.5