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An Information Portal to 105339 Biological Macromolecular Structures

SOLUTION NMR
Materials and Methods page
4BS2
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    n/a  
     
    Spectrometer Info
    Field Strength 900.0
    Manufacturer BRUKER
    Model AVANCE
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 94%WATER/6%D2O
    Ionic Strength 50MM
    pH 6.8
    Temperature 298.0
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method SIMULATED ANNEALING COMBINED WITH MOLECULAR DYNAMICS IN TORSION ANGLE SPACE
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria LOWEST ENERGY AND RESTRAINT VIOLATION
    Conformers Calculated Total Number 50
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 3D C13-EDITED NOESY
    IDs experiment ID:2 solution ID:1 conditons ID:2
    Type 3D N15- EDITED NOESY
    IDs experiment ID:3 solution ID:1 conditons ID:3
    Type 2D NOESY
    IDs experiment ID:4 solution ID:1 conditons ID:4
    Type 2D TOCSY
    IDs experiment ID:5 solution ID:1 conditons ID:5
    Type 3D HCCH TOCSY
     
  •   Additional NMR Experimental Information Hide
    Details
    Detail MEASUREMENTS WERE PERFORMED ON THREE DIFFERENT SAMPLES,15N -LABELLED TDP-43 WITH UNLABELLED RNA, 13C,15N- LABELLED TDP-43 WITH UNLABELLED RNA, 15N-LABELLED TDP-43 WITH 13C,15N-LABELLED RNA
     
  •   Software and Computing Hide
    NMR Software
    Classification structure solution
    Software Name CYANA
    Authors CASE ET AL
    Classification refinement
    Software Name AMBER