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X-RAY DIFFRACTION
Materials and Methods page
4BR9
  •   Crystallization Hide
    Crystallization Experiments
    pH 5.5
    Details 9% PEG3350, 100MM (NH4)2SO4, 100MM NAMES PH 5.5
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 62.5 α = 90
    b = 86.2 β = 107.14
    c = 72.21 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL
    Type DECTRIS
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type BESSY BEAMLINE 14.2
    Wavelength 1.2144
    Site BESSY
    Beamline 14.2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) -3.0
    Resolution(High) 1.4
    Resolution(Low) 29
    Number Reflections(Observed) 138132
    Percent Possible(Observed) 96.2
    R Merge I(Observed) 0.04
    Redundancy 4.5
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.4
    Resolution(Low) 29.2
    Number of Reflections(Observed) 136028
    Number of Reflections(R-Free) 2070
    Percent Reflections(Observed) 96.13
    R-Factor(Observed) 0.12798
    R-Work 0.12736
    R-Free 0.17113
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 20.844
    Anisotropic B[1][1] 0.53
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.25
    Anisotropic B[2][2] 0.13
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.62
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.4
    Shell Resolution(Low) 1.436
    Number of Reflections(R-Free) 106
    Number of Reflections(R-Work) 7073
    R-Factor(R-Work) 0.205
    R-Factor(R-Free) 0.256
    Percent Reflections(Observed) 67.74
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_sphericity_bonded 19.285
    r_sphericity_free 32.599
    r_rigid_bond_restr 6.399
    r_gen_planes_refined 0.013
    r_chiral_restr 0.129
    r_dihedral_angle_4_deg 9.745
    r_dihedral_angle_3_deg 12.509
    r_dihedral_angle_2_deg 43.259
    r_dihedral_angle_1_deg 6.12
    r_angle_refined_deg 1.957
    r_bond_refined_d 0.02
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5771
    Nucleic Acid Atoms 0
    Heterogen Atoms 26
    Solvent Atoms 648
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement REFMAC 5.7.0029
     
    Software
    refinement REFMAC version: 5.7.0029